RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 ZNF554Q86TJ5 538 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 STK32CQ86UX6 486 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 TFB1MQ8WVM0 346 aaKnown RBP11.19□□□□□ -0.62
CCDC18-201ENST00000343253 PABPC5Q96DU9 382 aaKnown RBP11.19□□□□□ -0.62
CCDC18-201ENST00000343253 TMEM237Q96Q45 408 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 FUCA2Q9BTY2 467 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 LRMDAQ9H2I8 198 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 SH3GLB1Q9Y371 365 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 ADCY6O43306 1168 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
CCDC18-201ENST00000343253 KATNA1O75449 491 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 AKAP5P24588 427 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 RXRGP48443 463 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 PPP3CCP48454 512 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 DDR1Q08345 913 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 ILF2Q12905 390 aaKnown RBP11.19□□□□□ -0.62
CCDC18-201ENST00000343253 NR1D2Q14995 579 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 EPHA10Q5JZY3 1008 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 FOXR1Q6PIV2 292 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 TMEM26Q6ZUK4 368 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 TSPAN14Q8NG11 270 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 SPATA16Q9BXB7 569 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 UGT2B28Q9BY64 529 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 ZNF341Q9BYN7 854 aa11.19□□□□□ -0.62
CCDC18-201ENST00000343253 F5H6K3 240 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 INPP4BO15327 924 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 YWHABP31946 246 aaKnown RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 FLT3P36888 993 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 ATP12AP54707 1039 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 KLRC3Q07444 240 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 CLEC16AQ2KHT3 1053 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 DGKKQ5KSL6 1271 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 ZDHHC13Q8IUH4 622 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 CYP4Z2PQ8N1L4 340 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 TDRD5Q8NAT2 981 aaKnown RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 EXD1Q8NHP7 514 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 ZNF398Q8TD17 642 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 NDNQ99608 321 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 NIF3L1Q9GZT8 377 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 SMARCAD1Q9H4L7 1026 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 CLIC5Q9NZA1 410 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 CRNNQ9UBG3 495 aaPredicted RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 POLG2Q9UHN1 485 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 AGAP1Q9UPQ3 857 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 PIK3CDO00329 1044 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 MTRF1O75570 445 aaKnown RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 CBX6O95503 412 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 PTDSS1P48651 473 aaKnown RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 AKR1D1P51857 326 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 HIST2H2ACQ16777 129 aaPredicted RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 XKR3Q5GH77 459 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 HIST2H2AA3Q6FI13 130 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 GPAT2Q6NUI2 795 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 SLC22A9Q8IVM8 553 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 CENPIQ92674 756 aaPredicted RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 NT5C1AQ9BXI3 368 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 MYLK2Q9H1R3 596 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 HOXC10Q9NYD6 342 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 RUVBL2Q9Y230 463 aaKnown RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 PRAMEF22A3QJZ6 481 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 ZNF682O95780 498 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 RARBP10826 455 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 ITGAXP20702 1163 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 PRDX5P30044 214 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 TSNQ15631 228 aaKnown RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 NFIL3Q16649 462 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 ACCSLQ4AC99 568 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 SNRNP48Q6IEG0 339 aaKnown RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 KRT77Q7Z794 578 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 SFRP1Q8N474 314 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 IGDCC4Q8TDY8 1250 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 ATG4AQ8WYN0 398 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 KCTD10Q9H3F6 313 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 WWOXQ9NZC7 414 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 TRMT6Q9UJA5 497 aaKnown RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 ASAP1Q9ULH1 1129 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 ATP7BP35670 1465 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 FAM220BPB1ANY3 271 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 WARSP23381 471 aaKnown RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 RGS7P49802 495 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 HERVK_113P62684 666 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 SLC9A5Q14940 896 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 DGKDQ16760 1214 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 TCHHL1Q5QJ38 904 aaPredicted RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 ATAD3BQ5T9A4 648 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 DENND6AQ8IWF6 608 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 DGCR14Q96DF8 476 aaKnown RBP11.18□□□□□ -0.62
CCDC18-201ENST00000343253 RNF146Q9NTX7 359 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 KCNK4Q9NYG8 393 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 ERAP1Q9NZ08 941 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 DUSP12Q9UNI6 340 aa11.18□□□□□ -0.62
CCDC18-201ENST00000343253 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
CCDC18-201ENST00000343253 CD3EAPO15446 510 aaKnown RBP11.17□□□□□ -0.62
CCDC18-201ENST00000343253 SEC24AO95486 1093 aa11.17□□□□□ -0.62
CCDC18-201ENST00000343253 PRKCBP05771 671 aa11.17□□□□□ -0.62
CCDC18-201ENST00000343253 ANXA6P08133 673 aa11.17□□□□□ -0.62
CCDC18-201ENST00000343253 MYL4P12829 197 aa11.17□□□□□ -0.62
CCDC18-201ENST00000343253 GEMP55040 296 aa11.17□□□□□ -0.62
CCDC18-201ENST00000343253 TRAP1Q12931 704 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms