RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 GIPC2Q8TF65 315 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 ELMO2Q96JJ3 720 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 CEP41Q9BYV8 373 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 TRIM15Q9C019 465 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 KIF1AQ12756 1690 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 SIGLEC16A6NMB1 481 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 MYCP01106 439 aaPredicted RBP7.44□□□□□ -1.22
VCAN-202ENST00000342785 PHEXP78562 749 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 ULK4Q96C45 1275 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 MYLK2Q9H1R3 596 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 SUFUQ9UMX1 484 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 ARHGAP26Q9UNA1 814 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 PPME1Q9Y570 386 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 SLC4A7Q9Y6M7 1214 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 CPA3P15088 417 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 AMPD1P23109 780 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 TGFB2P61812 414 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 KCNJ2P63252 427 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 BST2Q10589 180 aaKnown RBP7.44□□□□□ -1.22
VCAN-202ENST00000342785 CYTH1Q15438 398 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 QPCTQ16769 361 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 TMTC4Q5T4D3 741 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 SLC25A41Q8N5S1 370 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 GTF3C2Q8WUA4 911 aaPredicted RBP7.44□□□□□ -1.22
VCAN-202ENST00000342785 EME1Q96AY2 570 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 HAUS8Q9BT25 410 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 ST6GALNAC4Q9H4F1 302 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 SETD4Q9NVD3 440 aa7.44□□□□□ -1.22
VCAN-202ENST00000342785 TNFSF9P41273 254 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 SLC30A9Q6PML9 568 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 SCUBE1Q8IWY4 988 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 APOPT1Q96IL0 206 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 WDCPQ9H6R7 721 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 DCDC2Q9UHG0 476 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 A0A0B4J269 797 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 TMEM191CA6NGB0 347 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 TIMM44O43615 452 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 RPA3P35244 121 aaPredicted RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 YWHAZP63104 245 aaKnown RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 CRYMQ14894 314 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ACAP1Q15027 740 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 C15orf59Q2T9L4 293 aaPredicted RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 COLGALT1Q8NBJ5 622 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 BSNDQ8WZ55 320 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 PARK7Q99497 189 aaKnown RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 KRT82Q9NSB4 513 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 PIH1D1Q9NWS0 290 aaKnown RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 NSMCE4AQ9NXX6 385 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ARMCX1Q9P291 453 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 TJP2Q9UDY2 1190 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ITGA11Q9UKX5 1188 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 AURKCQ9UQB9 309 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 C15orf41Q9Y2V0 281 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 DISP2A7MBM2 1401 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ARHGAP10A1A4S6 786 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 CACNA1FO60840 1977 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 HMBSP08397 361 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 CETPP11597 493 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 MMP8P22894 467 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 SPIRE1Q08AE8 756 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 TBCCQ15814 346 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ANO4Q32M45 955 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 SLC45A4Q5BKX6 768 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 TMCO4Q5TGY1 634 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 FRA10AC1Q70Z53 315 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 SETD3Q86TU7 594 aaPredicted RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 CALML6Q8TD86 181 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ABTB1Q969K4 478 aaPredicted RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 FMN2Q9NZ56 1722 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 E5RI56 91 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ALOX15BO15296 676 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 MICAL2O94851 1124 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ABHD2P08910 425 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 GLRBP48167 497 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 MPP3Q13368 585 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 TMEM132BQ14DG7 1078 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 LRRC23Q53EV4 343 aaPredicted RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 SNX30Q5VWJ9 437 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 LAYNQ6UX15 382 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 CATSPERGQ6ZRH7 1159 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 TSPAN17Q96FV3 270 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ING2Q9H160 280 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 KIF9Q9HAQ2 790 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 SNTG2Q9NY99 539 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 COL20A1Q9P218 1284 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 AJAP1Q9UKB5 411 aaPredicted RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 RIPK3Q9Y572 518 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 PCDHA2Q9Y5H9 948 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ORC6Q9Y5N6 252 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 MED1Q15648 1581 aaPredicted RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 hCG_1818297A0A087WSY0 165 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 TULP2O00295 520 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 CYB561D2O14569 222 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ANGPT2O15123 496 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ZNF862O60290 1169 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 E2F6O75461 281 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ANXA9O76027 345 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 UNC5CO95185 931 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ITGA9Q13797 1035 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 STRA8Q7Z7C7 330 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms