RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 CLEC4CQ8WTT0 213 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 SLITRK1Q96PX8 696 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 NCAPGQ9BPX3 1015 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 TMEM51Q9NW97 253 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 RRN3Q9NYV6 651 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 CHORDC1Q9UHD1 332 aaPredicted RBP17.14■□□□□ 0.33
SNED1-202ENST00000342631 ATG2AQ2TAZ0 1938 aa17.14■□□□□ 0.33
SNED1-202ENST00000342631 C2CD4BA6NLJ0 364 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 DAB1O75553 588 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 LTFP02788 710 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 MAN1A1P33908 653 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 SLC1A1P43005 524 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 PPP3CCP48454 512 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 DUSP6Q16828 381 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 SLFN11Q7Z7L1 901 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 ELMOD1Q8N336 334 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 NIPA2Q8N8Q9 360 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 PSMG2Q969U7 264 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 FAM149B1Q96BN6 582 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 PIWIL1Q96J94 861 aaKnown RBP17.13■□□□□ 0.33
SNED1-202ENST00000342631 ABCC13Q9NSE7 274 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 ZNF638Q14966 1978 aaKnown RBP17.13■□□□□ 0.33
SNED1-202ENST00000342631 YJEFN3A6XGL0 299 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 E7ENQ6 273 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 DPYSL4O14531 572 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 BUB1BO60566 1050 aaPredicted RBP17.13■□□□□ 0.33
SNED1-202ENST00000342631 CSPG5O95196 566 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 POU2F2P09086 479 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 HNRNPA1P09651 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
SNED1-202ENST00000342631 GPD1P21695 349 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 NOS2P35228 1153 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 MATKP42679 507 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 ZNF143P52747 638 aaPredicted RBP17.13■□□□□ 0.33
SNED1-202ENST00000342631 ETF1P62495 437 aaKnown RBP17.13■□□□□ 0.33
SNED1-202ENST00000342631 ZNF569Q5MCW4 686 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 PPM1LQ5SGD2 360 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 BHLHA9Q7RTU4 235 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 DAAM2Q86T65 1068 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 LRRC57Q8N9N7 239 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.13■□□□□ 0.33
SNED1-202ENST00000342631 GIPC2Q8TF65 315 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 FBXO32Q969P5 355 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 SLC2A13Q96QE2 648 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 TLR8Q9NR97 1041 aaKnown RBP17.13■□□□□ 0.33
SNED1-202ENST00000342631 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.13■□□□□ 0.33
SNED1-202ENST00000342631 CAPN6Q9Y6Q1 641 aa17.13■□□□□ 0.33
SNED1-202ENST00000342631 MYO16Q9Y6X6 1858 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 GRID2IPA4D2P6 1211 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 PALMO75781 387 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 ZMYND10O75800 440 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 PROSCO94903 275 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 SPATA31D3P0C874 917 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 PDGFRAP16234 1089 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 PTPN9P43378 593 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 RNASE9P60153 205 aaKnown RBP17.12■□□□□ 0.33
SNED1-202ENST00000342631 GNG11P61952 73 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 USP46P62068 366 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 SPATA31D4Q6ZUB0 917 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 ZNF276Q8N554 614 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 JOSD2Q8TAC2 188 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 CNPY3Q9BT09 278 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 DDX23Q9BUQ8 820 aaKnown RBP17.12■□□□□ 0.33
SNED1-202ENST00000342631 IRX2Q9BZI1 471 aaPredicted RBP17.12■□□□□ 0.33
SNED1-202ENST00000342631 NSUN3Q9H649 340 aaKnown RBP17.12■□□□□ 0.33
SNED1-202ENST00000342631 MAN1C1Q9NR34 630 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 ZDHHC7Q9NXF8 308 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 CLIC5Q9NZA1 410 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 STAP1Q9ULZ2 295 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 CHD7Q9P2D1 2997 aa17.12■□□□□ 0.33
SNED1-202ENST00000342631 CAPN9O14815 690 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 HMGA1P17096 107 aaKnown RBP17.11■□□□□ 0.33
SNED1-202ENST00000342631 SDC4P31431 198 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 FLT3P36888 993 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 YWHAGP61981 247 aaKnown RBP eCLIP17.11■□□□□ 0.33
SNED1-202ENST00000342631 IFRD2Q12894 506 aaPredicted RBP17.11■□□□□ 0.33
SNED1-202ENST00000342631 MESDQ14696 234 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 TAF5Q15542 800 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 SNX30Q5VWJ9 437 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 BSPRYQ5W0U4 402 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 DNAJB7Q7Z6W7 309 aaPredicted RBP17.11■□□□□ 0.33
SNED1-202ENST00000342631 GPR152Q8TDT2 470 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 RXFP2Q8WXD0 754 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 ZNF512Q96ME7 567 aaPredicted RBP17.11■□□□□ 0.33
SNED1-202ENST00000342631 CDK5RAP1Q96SZ6 601 aaKnown RBP17.11■□□□□ 0.33
SNED1-202ENST00000342631 JRKLQ9Y4A0 524 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 HCFC2Q9Y5Z7 792 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 GRAP2O75791 330 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 GJB6O95452 261 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 ZDHHC11BP0C7U3 371 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 PSMA2P25787 234 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 TAF10Q12962 218 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 BTBD8Q5XKL5 378 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 ADGRD2Q7Z7M1 963 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 EMC1Q8N766 993 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 NT5C3BQ969T7 300 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 C16orf45Q96MC5 204 aaPredicted RBP17.11■□□□□ 0.33
SNED1-202ENST00000342631 ALG6Q9Y672 507 aa17.11■□□□□ 0.33
SNED1-202ENST00000342631 MYO7AQ13402 2215 aa17.1■□□□□ 0.33
SNED1-202ENST00000342631 PER2O15055 1255 aa17.1■□□□□ 0.33
SNED1-202ENST00000342631 RNF8O76064 485 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms