RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 QRICH2Q9H0J4 1663 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 IFRD1O00458 451 aaPredicted RBP15.71■□□□□ 0.11
COL11A2-201ENST00000341947 CPSF4O95639 269 aaKnown RBP15.71■□□□□ 0.11
COL11A2-201ENST00000341947 PLIN5Q00G26 463 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 SLC29A2Q14542 456 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 USP49Q70CQ1 688 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 NLRP9Q7RTR0 991 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 PPP1R3GB7ZBB8 358 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 PLA2G6O60733 806 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 EPHX2P34913 555 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 CPA2P48052 419 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 TTC33Q6PID6 262 aaPredicted RBP15.71■□□□□ 0.11
COL11A2-201ENST00000341947 COL23A1Q86Y22 540 aaPredicted RBP15.71■□□□□ 0.11
COL11A2-201ENST00000341947 CBWD2Q8IUF1 395 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 ANKRD49Q8WVL7 239 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 UTP6Q9NYH9 597 aaKnown RBP15.71■□□□□ 0.11
COL11A2-201ENST00000341947 AP4E1Q9UPM8 1137 aa15.71■□□□□ 0.11
COL11A2-201ENST00000341947 GNG14A0A1W2PPG7 69 aa15.71■□□□□ 0.1
COL11A2-201ENST00000341947 GLP2RO95838 553 aa15.71■□□□□ 0.1
COL11A2-201ENST00000341947 ATN1P54259 1190 aaPredicted RBP15.71■□□□□ 0.1
COL11A2-201ENST00000341947 GRB10Q13322 594 aa15.71■□□□□ 0.1
COL11A2-201ENST00000341947 MTSS1LQ765P7 747 aa15.71■□□□□ 0.1
COL11A2-201ENST00000341947 HOMEZQ8IX15 550 aa15.71■□□□□ 0.1
COL11A2-201ENST00000341947 DNAJC9Q8WXX5 260 aa15.71■□□□□ 0.1
COL11A2-201ENST00000341947 KAT2BQ92831 832 aa15.71■□□□□ 0.1
COL11A2-201ENST00000341947 CARD9Q9H257 536 aa15.71■□□□□ 0.1
COL11A2-201ENST00000341947 PAPOLBQ9NRJ5 636 aaKnown RBP15.71■□□□□ 0.1
COL11A2-201ENST00000341947 PADI4Q9UM07 663 aa15.71■□□□□ 0.1
COL11A2-201ENST00000341947 SETD1BQ9UPS6 1966 aaKnown RBP15.71■□□□□ 0.1
COL11A2-201ENST00000341947 CD163L1Q9NR16 1453 aa15.71■□□□□ 0.1
COL11A2-201ENST00000341947 CBX4O00257 560 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 NPTX2P47972 431 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 C9orf131Q5VYM1 1079 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 GBA2Q9HCG7 927 aaPredicted RBP15.7■□□□□ 0.1
COL11A2-201ENST00000341947 GPATCH2LQ9NWQ4 482 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.7■□□□□ 0.1
COL11A2-201ENST00000341947 PCDH8O95206 1070 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 TBC1D13Q9NVG8 400 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 THG1LQ9NWX6 298 aaKnown RBP15.7■□□□□ 0.1
COL11A2-201ENST00000341947 SYBUQ9NX95 663 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 SOX13Q9UN79 622 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 RAD54BQ9Y620 910 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 ALDH2P05091 517 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 EIF2S1P05198 315 aaKnown RBP15.7■□□□□ 0.1
COL11A2-201ENST00000341947 MMP14P50281 582 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 STARD3Q14849 445 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 PCNX4Q63HM2 1172 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 TMEM154Q6P9G4 183 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 SUGP1Q8IWZ8 645 aaKnown RBP15.7■□□□□ 0.1
COL11A2-201ENST00000341947 MIER2Q8N344 545 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 SMAD5Q99717 465 aaKnown RBP15.7■□□□□ 0.1
COL11A2-201ENST00000341947 PPP2R3BQ9Y5P8 575 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 NFIBO00712 420 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 MED24O75448 989 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 THRAP10827 490 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 SERPINB5P36952 375 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 CNBD2Q96M20 576 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 PXMP2Q9NR77 195 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 KANSL3Q9P2N6 904 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 CTNNAL1Q9UBT7 734 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 PSMD12O00232 456 aaPredicted RBP15.7■□□□□ 0.1
COL11A2-201ENST00000341947 RENBPP51606 427 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 BST2Q10589 180 aaKnown RBP15.7■□□□□ 0.1
COL11A2-201ENST00000341947 LRRC8DQ7L1W4 858 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 LRRC6Q86X45 466 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 ACER1Q8TDN7 264 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 KCNB2Q92953 911 aa15.7■□□□□ 0.1
COL11A2-201ENST00000341947 LSP1P33241 339 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 HALP42357 657 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 KCNT1Q5JUK3 1230 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 IRAK1BP1Q5VVH5 260 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 TMC7Q7Z402 723 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 DEFB128Q7Z7B8 93 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 NT5MQ9NPB1 228 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 RBP1P09455 135 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 RAB27AP51159 221 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 CHRNB3Q05901 458 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 NFYCQ13952 458 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 CLEC17AQ6ZS10 378 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 KIF2BQ8N4N8 673 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 TMEM176AQ96HP8 235 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 CYP3A43Q9HB55 503 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 STMN3Q9NZ72 180 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 SPATA31A5Q5VU36 1347 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 SPATA31A7Q8IWB4 1347 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 CYP11B1P15538 503 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 ZNF544Q6NX49 715 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 CCDC33Q8N5R6 958 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL11A2-201ENST00000341947 FOXN3O00409 490 aaPredicted RBP15.69■□□□□ 0.1
COL11A2-201ENST00000341947 TFE3P19532 575 aaPredicted RBP15.69■□□□□ 0.1
COL11A2-201ENST00000341947 SREBF1P36956 1147 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 B3GALNT2Q8NCR0 500 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 PPP1R14AQ96A00 147 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 DEPDC7Q96QD5 511 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 CPA4Q9UI42 421 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 HPS5Q9UPZ3 1129 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 CNTNAP2Q9UHC6 1331 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 CASTOR2A6NHX0 329 aa15.69■□□□□ 0.1
COL11A2-201ENST00000341947 TBKBP1A7MCY6 615 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms