RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 WDR72Q3MJ13 1102 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 ZSCAN23Q3MJ62 389 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 SLC39A12Q504Y0 691 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 ERAP2Q6P179 960 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 GRASPQ7Z6J2 395 aaPredicted RBP10.93□□□□□ -0.66
TPM3-207ENST00000341372 CCDC116Q8IYX3 515 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 DCP1BQ8IZD4 617 aaKnown RBP10.93□□□□□ -0.66
TPM3-207ENST00000341372 ATAD1Q8NBU5 361 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 CLUHP3Q96NS8 147 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 PGLYRP2Q96PD5 576 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 YIPF4Q9BSR8 244 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 SPATA9Q9BWV2 254 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 AASDHPPTQ9NRN7 309 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 EPS15L1Q9UBC2 864 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 DNMT3BQ9UBC3 853 aaKnown RBP10.93□□□□□ -0.66
TPM3-207ENST00000341372 CTNND2Q9UQB3 1225 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 NME7Q9Y5B8 376 aa10.93□□□□□ -0.66
TPM3-207ENST00000341372 FAM221AA4D161 298 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 PAGE1O75459 146 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 HLA-DRAP01903 254 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 GCLMP48507 274 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 ZNF165P49910 485 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 ARSDP51689 593 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 ZNF445P59923 1031 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 TNNC1P63316 161 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 ITKQ08881 620 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 DUSP4Q13115 394 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 SGSM1Q2NKQ1 1148 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 FOXB2Q5VYV0 432 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 KRT39Q6A163 491 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 KLHL10Q6JEL2 608 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 FAM171BQ6P995 826 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 RBM43Q6ZSC3 357 aaKnown RBP10.92□□□□□ -0.66
TPM3-207ENST00000341372 FRMD5Q7Z6J6 570 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 TTC9BQ8N6N2 239 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 RBBP8NLQ8NC74 664 aaPredicted RBP10.92□□□□□ -0.66
TPM3-207ENST00000341372 TAS1R2Q8TE23 839 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 EEF2KMTQ96G04 330 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 TRIM8Q9BZR9 551 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 TMLHEQ9NVH6 421 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 CEP72Q9P209 647 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 CDH9Q9ULB4 789 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 PI4K2BG5E9Z4 385 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 HCRTO43612 131 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 STX10O60499 249 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 MBD3O95983 291 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 PIK3CAP42336 1068 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 MXI1P50539 228 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 NTHL1P78549 312 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 TWF1Q12792 350 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 PABPC1LQ4VXU2 614 aaKnown RBP10.92□□□□□ -0.66
TPM3-207ENST00000341372 ZNF667Q5HYK9 610 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 PRSS36Q5K4E3 855 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 MLKLQ8NB16 471 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 LEMD2Q8NC56 503 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 GATAD2BQ8WXI9 593 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 SLC35C1Q96A29 364 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 ACSF2Q96CM8 615 aaPredicted RBP10.92□□□□□ -0.66
TPM3-207ENST00000341372 FUBP3Q96I24 572 aaKnown RBP eCLIP10.92□□□□□ -0.66
TPM3-207ENST00000341372 FAXDC2Q96IV6 333 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 MYADMQ96S97 322 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 MMS19Q96T76 1030 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 SYT15Q9BQS2 421 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 MRPL45Q9BRJ2 306 aaKnown RBP10.92□□□□□ -0.66
TPM3-207ENST00000341372 MYO10Q9HD67 2058 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 HCFC1R1Q9NWW0 138 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 ABI2Q9NYB9 513 aaPredicted RBP10.92□□□□□ -0.66
TPM3-207ENST00000341372 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.92□□□□□ -0.662e-12■■□□□ 14
TPM3-207ENST00000341372 RWDD2AQ9UIY3 292 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 COQ4Q9Y3A0 265 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 DAAM1Q9Y4D1 1078 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 PCDHB5Q9Y5E4 795 aa10.92□□□□□ -0.66
TPM3-207ENST00000341372 ZFP37Q9Y6Q3 630 aaPredicted RBP10.92□□□□□ -0.66
TPM3-207ENST00000341372 A0A1W2PQH9 124 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 PMM2O15305 246 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 S1PR4O95977 384 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 RHOP08100 348 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 HAPLN1P10915 354 aaPredicted RBP10.91□□□□□ -0.66
TPM3-207ENST00000341372 PTPN2P17706 415 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 ATF6P18850 670 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 CES1P23141 567 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 SP100P23497 879 aaPredicted RBP10.91□□□□□ -0.66
TPM3-207ENST00000341372 ACAT1P24752 427 aaKnown RBP10.91□□□□□ -0.66
TPM3-207ENST00000341372 LMO2P25791 158 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 ASPAP45381 313 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 TUFMP49411 452 aaKnown RBP10.91□□□□□ -0.66
TPM3-207ENST00000341372 CFAP221Q4G0U5 840 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 TMC8Q8IU68 726 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 MYRIPQ8NFW9 859 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 MED15Q96RN5 788 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 SMYD3Q9H7B4 428 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 CRTAC1Q9NQ79 661 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 ARMCX3Q9UH62 379 aaPredicted RBP10.91□□□□□ -0.66
TPM3-207ENST00000341372 SALL4Q9UJQ4 1053 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 ASB3Q9Y575 518 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 GREB1Q4ZG55 1949 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 DENND4CQ5VZ89 1909 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 TK2O00142 265 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 DCXO43602 365 aa10.91□□□□□ -0.66
TPM3-207ENST00000341372 P4HA1P13674 534 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms