RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 HMGCRP04035 888 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 SLC25A11Q02978 314 aaKnown RBP16.78■□□□□ 0.28
SCARB1-202ENST00000339570 XKR3Q5GH77 459 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 RAPH1Q70E73 1250 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 SAMD7Q7Z3H4 446 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 ULK2Q8IYT8 1036 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 PDGFDQ9GZP0 370 aaPredicted RBP16.78■□□□□ 0.28
SCARB1-202ENST00000339570 MAN1C1Q9NR34 630 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 CNTNAP2Q9UHC6 1331 aa16.77■□□□□ 0.28
SCARB1-202ENST00000339570 C3orf70A6NLC5 250 aaPredicted RBP16.77■□□□□ 0.28
SCARB1-202ENST00000339570 ZBED1O96006 694 aa16.77■□□□□ 0.28
SCARB1-202ENST00000339570 CSH1P0DML2 217 aa16.77■□□□□ 0.28
SCARB1-202ENST00000339570 CSH2P0DML3 217 aa16.77■□□□□ 0.28
SCARB1-202ENST00000339570 CXCL8P10145 99 aa16.77■□□□□ 0.28
SCARB1-202ENST00000339570 RARBP10826 455 aa16.77■□□□□ 0.28
SCARB1-202ENST00000339570 PHKA2P46019 1235 aa16.77■□□□□ 0.28
SCARB1-202ENST00000339570 GTF2A2P52657 109 aa16.77■□□□□ 0.28
SCARB1-202ENST00000339570 NSUN6Q8TEA1 469 aaKnown RBP16.77■□□□□ 0.28
SCARB1-202ENST00000339570 SLC7A8Q9UHI5 535 aa16.77■□□□□ 0.28
SCARB1-202ENST00000339570 LNPEPQ9UIQ6 1025 aa16.77■□□□□ 0.28
SCARB1-202ENST00000339570 AK5Q9Y6K8 562 aa16.77■□□□□ 0.28
SCARB1-202ENST00000339570 ASS1P00966 412 aaKnown RBP16.77■□□□□ 0.27
SCARB1-202ENST00000339570 KRT7P08729 469 aa16.77■□□□□ 0.27
SCARB1-202ENST00000339570 ANPEPP15144 967 aa16.77■□□□□ 0.27
SCARB1-202ENST00000339570 PDGFRAP16234 1089 aa16.77■□□□□ 0.27
SCARB1-202ENST00000339570 DUOXA2Q1HG44 320 aa16.77■□□□□ 0.27
SCARB1-202ENST00000339570 NIPA1Q7RTP0 329 aa16.77■□□□□ 0.27
SCARB1-202ENST00000339570 CRLF3Q8IUI8 442 aa16.77■□□□□ 0.27
SCARB1-202ENST00000339570 PHACTR1Q9C0D0 580 aa16.77■□□□□ 0.27
SCARB1-202ENST00000339570 GINS2Q9Y248 185 aa16.77■□□□□ 0.27
SCARB1-202ENST00000339570 ITM2AO43736 263 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 SESN2P58004 480 aaPredicted RBP16.76■□□□□ 0.27
SCARB1-202ENST00000339570 INHBEP58166 350 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 IRGCQ6NXR0 463 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 C12orf29Q8N999 325 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 DEPDC1BQ8WUY9 529 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 PGBD4Q96DM1 585 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 ARHGEF4Q9NR80 690 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 SEPT10Q9P0V9 454 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 KRT37O76014 449 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 SAT1P21673 171 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 PGGT1BP53609 377 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 ATXN1P54253 815 aaKnown RBP16.76■□□□□ 0.27
SCARB1-202ENST00000339570 HSF5Q4G112 596 aaPredicted RBP16.76■□□□□ 0.27
SCARB1-202ENST00000339570 WDR78Q5VTH9 848 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 BBS12Q6ZW61 710 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 SLC44A1Q8WWI5 657 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 EBF3Q9H4W6 596 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 RBBP6Q7Z6E9 1792 aaKnown RBP16.76■□□□□ 0.27
SCARB1-202ENST00000339570 OATP04181 439 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 OR52E8Q6IFG1 317 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 RASSF3Q86WH2 238 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 RNF148Q8N7C7 305 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 FAM136AQ96C01 138 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 LPIN3Q9BQK8 851 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 FAM49BQ9NUQ9 324 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 DNAJC16Q9Y2G8 782 aa16.76■□□□□ 0.27
SCARB1-202ENST00000339570 SUPT20HL2P0C7V6 817 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 POLR2BP30876 1174 aaKnown RBP16.75■□□□□ 0.27
SCARB1-202ENST00000339570 ETV4P43268 484 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 GRAMD1BQ3KR37 738 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 SUPT20HL1Q3ZLR7 823 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 NBPF12Q5TAG4 269 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-202ENST00000339570 SLFN12LQ6IEE8 588 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 ABHD15Q6UXT9 468 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 SLC26A11Q86WA9 606 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 STRIP2Q9ULQ0 834 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 E7ENQ6 273 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 LIN7AO14910 233 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-202ENST00000339570 SNRPAP09012 282 aaKnown RBP16.75■□□□□ 0.27
SCARB1-202ENST00000339570 YWHAZP63104 245 aaKnown RBP16.75■□□□□ 0.27
SCARB1-202ENST00000339570 MRPS5P82675 430 aaKnown RBP16.75■□□□□ 0.27
SCARB1-202ENST00000339570 EEF1DP3Q658K8 133 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 RNF217Q8TC41 542 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 PPP1R13LQ8WUF5 828 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 RXFP2Q8WXD0 754 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 STX18Q9P2W9 335 aaKnown RBP16.75■□□□□ 0.27
SCARB1-202ENST00000339570 GJA3Q9Y6H8 435 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 SIGLEC16A6NMB1 481 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 TRAFD1O14545 582 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-202ENST00000339570 PRPSAP2O60256 369 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
SCARB1-202ENST00000339570 PROCP04070 461 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 ITGB3P05106 788 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 OSBPP22059 807 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 ADORA2AP29274 412 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 BCAR1P56945 870 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 AP1B1Q10567 949 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 STX3Q13277 289 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 CA9Q16790 459 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 TTC39BQ5VTQ0 682 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-202ENST00000339570 ARHGAP24Q8N264 748 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 PORCNQ9H237 461 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 ZNF358Q9NW07 568 aa16.75■□□□□ 0.27
SCARB1-202ENST00000339570 MRPL42Q9Y6G3 142 aaKnown RBP16.75■□□□□ 0.27
SCARB1-202ENST00000339570 PGM3O95394 542 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 ASPHQ12797 758 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 OLIG2Q13516 323 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 AMHR2Q16671 573 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 DLK2Q6UY11 383 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms