RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 KIF9Q9HAQ2 790 aa13.51□□□□□ -0.25
SRSF3-201ENST00000339436 TDP1Q9NUW8 608 aa13.51□□□□□ -0.25
SRSF3-201ENST00000339436 OSER1Q9NX31 292 aa13.51□□□□□ -0.25
SRSF3-201ENST00000339436 OBP2AQ9NY56 170 aa13.51□□□□□ -0.25
SRSF3-201ENST00000339436 NAGPAQ9UK23 515 aa13.51□□□□□ -0.25
SRSF3-201ENST00000339436 ARHGAP26Q9UNA1 814 aa13.51□□□□□ -0.25
SRSF3-201ENST00000339436 CEP83Q9Y592 693 aa13.51□□□□□ -0.25
SRSF3-201ENST00000339436 ITIH6Q6UXX5 1313 aa13.51□□□□□ -0.25
SRSF3-201ENST00000339436 COCHO43405 550 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 CBFA2T2O43439 604 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 NARSO43776 548 aaKnown RBP13.5□□□□□ -0.25
SRSF3-201ENST00000339436 SRFP11831 508 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 LCP1P13796 627 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 HDCP19113 662 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 CDH5P33151 784 aaPredicted RBP13.5□□□□□ -0.25
SRSF3-201ENST00000339436 SLC7A9P82251 487 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 USP4Q13107 963 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 GRM2Q14416 872 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 TAF3Q5VWG9 929 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 SARM1Q6SZW1 724 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 GAS2L3Q86XJ1 694 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 ZNF677Q86XU0 584 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 FMNL3Q8IVF7 1028 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 UBALD2Q8IYN6 164 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 ARHGAP18Q8N392 663 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 CELF5Q8N6W0 485 aaKnown RBP13.5□□□□□ -0.25
SRSF3-201ENST00000339436 RIN3Q8TB24 985 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 SLC20A1Q8WUM9 679 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 LRRC3BQ96PB8 259 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 CYP2S1Q96SQ9 504 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 SLC4A5Q9BY07 1137 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 EDEM3Q9BZQ6 932 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 RBSNQ9H1K0 784 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 ST7Q9NRC1 585 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
SRSF3-201ENST00000339436 CLIC5Q9NZA1 410 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 ZNF318Q5VUA4 2279 aa13.5□□□□□ -0.25
SRSF3-201ENST00000339436 LRRC53A6NM62 1247 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 E5RJQ4 531 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 PIK3R2O00459 728 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 DPYSL4O14531 572 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 FBXO21O94952 628 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 LSM8O95777 96 aaKnown RBP13.49□□□□□ -0.25
SRSF3-201ENST00000339436 MMEP08473 750 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 ALADP13716 330 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 FERP16591 822 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 PSMC3P17980 439 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 ACADSBP45954 432 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 DAOAP59103 153 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 YWHAGP61981 247 aaKnown RBP eCLIP13.49□□□□□ -0.25
SRSF3-201ENST00000339436 ZXDAP98168 799 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 CDR2Q01850 454 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 ARID5AQ03989 594 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 FCHO2Q0JRZ9 810 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 ZNF77Q15935 545 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 KLHDC10Q6PID8 442 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 MFSD6LQ8IWD5 586 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 WDTC1Q8N5D0 677 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 BPIFB1Q8TDL5 484 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 NDRG1Q92597 394 aaKnown RBP13.49□□□□□ -0.25
SRSF3-201ENST00000339436 NOX5Q96PH1 765 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 CPXM1Q96SM3 734 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 NUP58Q9BVL2 599 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 RNF38Q9H0F5 515 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 SLC2A4RGQ9NR83 387 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 A0A1W2PQJ5 194 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 YJEFN3A6XGL0 299 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 E7ENQ6 273 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 PI4K2BG5E9Z4 385 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 MBL2P11226 248 aaPredicted RBP13.49□□□□□ -0.25
SRSF3-201ENST00000339436 RARGP13631 454 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 TCF3P15923 654 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 NOMO3P69849 1222 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 ZXDBP98169 803 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 FMO1Q01740 532 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 PTPN20Q4JDL3 420 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 E4F1Q66K89 784 aaPredicted RBP13.49□□□□□ -0.25
SRSF3-201ENST00000339436 TMEM110Q86TL2 294 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 ZNF276Q8N554 614 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 TMEM35BQ8NCS4 154 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 CLEC4CQ8WTT0 213 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 IRGQQ8WZA9 623 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 IQCDQ96DY2 449 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 ZFRQ96KR1 1074 aaKnown RBP13.49□□□□□ -0.25
SRSF3-201ENST00000339436 CDK5RAP1Q96SZ6 601 aaKnown RBP13.49□□□□□ -0.25
SRSF3-201ENST00000339436 ANP32EQ9BTT0 268 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 TRMT61BQ9BVS5 477 aaKnown RBP13.49□□□□□ -0.25
SRSF3-201ENST00000339436 NACA2Q9H009 215 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 PDCL3Q9H2J4 239 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 SMPD4Q9NXE4 827 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 TJP2Q9UDY2 1190 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 CPQQ9Y646 472 aa13.49□□□□□ -0.25
SRSF3-201ENST00000339436 KIAA1549LQ6ZVL6 1849 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 ARNTLO00327 626 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 DLL1O00548 723 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 PAPSS1O43252 624 aaPredicted RBP13.48□□□□□ -0.25
SRSF3-201ENST00000339436 SART1O43290 800 aaKnown RBP13.48□□□□□ -0.25
SRSF3-201ENST00000339436 GYPCP04921 128 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 CCDC172P0C7W6 258 aa13.48□□□□□ -0.25
SRSF3-201ENST00000339436 RALAP11233 206 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms