RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 MYL6P60660 151 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 IRX4P78413 519 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 LMAN2Q12907 356 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 FOXC1Q12948 553 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 TRIM61Q5EBN2 209 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 HECTD3Q5T447 861 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 EMC10Q5UCC4 262 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 FOXD4L5Q5VV16 416 aaPredicted RBP16.59■□□□□ 0.25
LINC01116-202ENST00000339037 CNNM4Q6P4Q7 775 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 ARMCX6Q7L4S7 300 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 FOXD4L4Q8WXT5 416 aaPredicted RBP16.59■□□□□ 0.25
LINC01116-202ENST00000339037 SYAP1Q96A49 352 aaPredicted RBP16.59■□□□□ 0.25
LINC01116-202ENST00000339037 OTUB2Q96DC9 234 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 XYLT2Q9H1B5 865 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 TFIP11Q9UBB9 837 aaKnown RBP16.59■□□□□ 0.25
LINC01116-202ENST00000339037 EVLQ9UI08 416 aaPredicted RBP16.59■□□□□ 0.25
LINC01116-202ENST00000339037 ATP8B3O60423 1300 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 TCRBV21S2A2A0A5A6 115 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 TBC1D3BA6NDS4 549 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 ADAM23O75077 832 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 PHACTR2O75167 634 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 PPP6R2O75170 966 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 PTGER3P43115 390 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 GAD2Q05329 585 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 ZNF699Q32M78 642 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 UAP1L1Q3KQV9 507 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 BTBD8Q5XKL5 378 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 UNQ6494/PRO21346Q6UXR6 183 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 FAM35AQ86V20 835 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 SYT12Q8IV01 421 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 TMEFF1Q8IYR6 380 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 PGBD3Q8N328 593 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 PHTF2Q8N3S3 785 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 SCAMP5Q8TAC9 235 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 ZNF516Q92618 1163 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 ZFRQ96KR1 1074 aaKnown RBP16.58■□□□□ 0.24
LINC01116-202ENST00000339037 KCNK16Q96T55 309 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 NUSAP1Q9BXS6 441 aaKnown RBP16.58■□□□□ 0.24
LINC01116-202ENST00000339037 GZF1Q9H116 711 aaPredicted RBP16.58■□□□□ 0.24
LINC01116-202ENST00000339037 SMYD3Q9H7B4 428 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 DMAP1Q9NPF5 467 aaPredicted RBP16.58■□□□□ 0.24
LINC01116-202ENST00000339037 ZDHHC4Q9NPG8 344 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 CHORDC1Q9UHD1 332 aaPredicted RBP16.58■□□□□ 0.24
LINC01116-202ENST00000339037 SH3BP1Q9Y3L3 701 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 NBEAQ8NFP9 2946 aa16.58■□□□□ 0.24
LINC01116-202ENST00000339037 ASCC3Q8N3C0 2202 aaKnown RBP16.57■□□□□ 0.24
LINC01116-202ENST00000339037 C1QTNF9BB2RNN3 333 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 HOXC11O43248 304 aaPredicted RBP16.57■□□□□ 0.24
LINC01116-202ENST00000339037 C1QTNF9P0C862 333 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 TUBP50607 506 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 SLC5A3P53794 718 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 BIRC3Q13489 604 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 BYSLQ13895 437 aaKnown RBP16.57■□□□□ 0.24
LINC01116-202ENST00000339037 MAP7D1Q3KQU3 841 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 PREPLQ4J6C6 727 aaPredicted RBP16.57■□□□□ 0.24
LINC01116-202ENST00000339037 SPDYCQ5MJ68 293 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 LYSMD4Q5XG99 296 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 UNC13DQ70J99 1090 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 TRMT11Q7Z4G4 463 aaKnown RBP16.57■□□□□ 0.24
LINC01116-202ENST00000339037 ETFBKMTQ8IXQ9 262 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 FRMD1Q8N878 549 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 NAT16Q8N8M0 369 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 SMARCD1Q96GM5 515 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 TNIP3Q96KP6 325 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 C7orf25Q9BPX7 421 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 MED10Q9BTT4 135 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 NACA2Q9H009 215 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 CCSER2Q9H7U1 834 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 MAGEF1Q9HAY2 307 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 CGNQ9P2M7 1197 aaKnown RBP16.57■□□□□ 0.24
LINC01116-202ENST00000339037 DEC1Q9P2X7 70 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 WASF3Q9UPY6 502 aa16.57■□□□□ 0.24
LINC01116-202ENST00000339037 ANKRD11Q6UB99 2663 aaPredicted RBP16.56■□□□□ 0.24
LINC01116-202ENST00000339037 EXOC3O60645 756 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 TULP3O75386 442 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 SPINK2P20155 84 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 DPP6P42658 865 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 MAPK8P45983 427 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 CASP4P49662 377 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 CDH8P55286 799 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 EHHADHQ08426 723 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 BMT2Q1RMZ1 405 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 ANO4Q32M45 955 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 FOXD4L6Q3SYB3 417 aaPredicted RBP16.56■□□□□ 0.24
LINC01116-202ENST00000339037 SNX30Q5VWJ9 437 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 SHC4Q6S5L8 630 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 FOXD4L3Q6VB84 417 aaPredicted RBP16.56■□□□□ 0.24
LINC01116-202ENST00000339037 SCARA5Q6ZMJ2 495 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 NUDT18Q6ZVK8 323 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 HSCBQ8IWL3 235 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 BBS7Q8IWZ6 715 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 C12orf56Q8IXR9 622 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 ZNF513Q8N8E2 541 aaPredicted RBP16.56■□□□□ 0.24
LINC01116-202ENST00000339037 DEFB124Q8NES8 71 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 ZNF396Q96N95 335 aaPredicted RBP16.56■□□□□ 0.24
LINC01116-202ENST00000339037 DUSP9Q99956 384 aaKnown RBP16.56■□□□□ 0.24
LINC01116-202ENST00000339037 VRTNQ9H8Y1 702 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 KRT82Q9NSB4 513 aa16.56■□□□□ 0.24
LINC01116-202ENST00000339037 TMEM74BQ9NUR3 256 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms