RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 IL23AQ9NPF7 189 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.58□□□□□ -0.56
LRP1-202ENST00000338962 PDCD11Q14690 1871 aaKnown RBP11.58□□□□□ -0.56
LRP1-202ENST00000338962 TLDC2A0PJX2 215 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 SMIM23A6NLE4 172 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 HCRTO43612 131 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 IFNB1P01574 187 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 FGFR1P11362 822 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 LMO2P25791 158 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 ADORA2BP29275 332 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 LILRA4P59901 499 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 ATP11AP98196 1134 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 OTUD4Q01804 1114 aaKnown RBP11.58□□□□□ -0.56
LRP1-202ENST00000338962 SLC6A3Q01959 620 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 GUCY1A3Q02108 690 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 FPGSQ05932 587 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 BST2Q10589 180 aaKnown RBP11.58□□□□□ -0.56
LRP1-202ENST00000338962 TAZQ16635 292 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 C15orf59Q2T9L4 293 aaPredicted RBP11.58□□□□□ -0.56
LRP1-202ENST00000338962 C6orf118Q5T5N4 469 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 SH3PXD2AQ5TCZ1 1133 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 CEP128Q6ZU80 1094 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 C16orf59Q7L2K0 433 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 PRUNE1Q86TP1 453 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 RFX6Q8HWS3 928 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 C10orf67Q8IYJ2 551 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 CRYBG2Q8N1P7 616 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 ANKRD52Q8NB46 1076 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 UHMK1Q8TAS1 419 aaKnown RBP11.58□□□□□ -0.56
LRP1-202ENST00000338962 SLC35B2Q8TB61 432 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 PPM1EQ8WY54 764 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 PGM2Q96G03 612 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 CFAP57Q96MR6 1250 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 TMEM121Q9BTD3 319 aa11.58□□□□□ -0.56
LRP1-202ENST00000338962 NGRNQ9NPE2 291 aaKnown RBP11.58□□□□□ -0.56
LRP1-202ENST00000338962 DNAJC17Q9NVM6 304 aaKnown RBP11.58□□□□□ -0.56
LRP1-202ENST00000338962 SAE1Q9UBE0 346 aaPredicted RBP11.58□□□□□ -0.56
LRP1-202ENST00000338962 PTGESO14684 152 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 NDC80O14777 642 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 RGS16O15492 202 aaPredicted RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 PAPSS1O43252 624 aaPredicted RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 MDH1P40925 334 aaKnown RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 MAGEA9P43362 315 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 CDH6P55285 790 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 GPS1Q13098 491 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 TAF5Q15542 800 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 UBAP2Q5T6F2 1119 aaKnown RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 TRNP1Q6NT89 227 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 HIBCHQ6NVY1 386 aaPredicted RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 CNKSR3Q6P9H4 555 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 GLIS1Q8NBF1 620 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 SLC2A14Q8TDB8 520 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 PEBP4Q96S96 227 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 MYCBPQ99417 103 aaPredicted RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 LPIN3Q9BQK8 851 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 DDX23Q9BUQ8 820 aaKnown RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 MAK16Q9BXY0 300 aaKnown RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 B3GNT5Q9BYG0 378 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 FOXP3Q9BZS1 431 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 STMN4Q9H169 189 aaPredicted RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 PCDH9Q9HC56 1237 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 LRRC4CQ9HCJ2 640 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 FAM105AQ9NUU6 356 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 SLC38A7Q9NVC3 462 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 RSPH14Q9UHP6 348 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 ALPK3Q96L96 1907 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 APOC4-APOC2K7ER74 178 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 DPYSL4O14531 572 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 DNALI1O14645 258 aaPredicted RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 RASGRF2O14827 1237 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 TTC4O95801 387 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 APOC2P02655 101 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 ZSCAN5DPP0CG00 497 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 LRPAP1P30533 357 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 CDR1P51861 262 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 SLC8A3P57103 927 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 PPP2R2AP63151 447 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 TCTN1Q2MV58 587 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 CCDC14Q49A88 953 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 SCYL2Q6P3W7 929 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 DEFB128Q7Z7B8 93 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 RTN4RL1Q86UN2 441 aaPredicted RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 MAP7D3Q8IWC1 876 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 ZCCHC9Q8N567 271 aaKnown RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 TOP6BLQ8N6T0 577 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 B3GALNT2Q8NCR0 500 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 FAM172AQ8WUF8 416 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 PPP1R10Q96QC0 940 aaKnown RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 NCAPGQ9BPX3 1015 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 LBHD1Q9BQE6 289 aaPredicted RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 TMEM109Q9BVC6 243 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 TSPYL2Q9H2G4 693 aaPredicted RBP11.57□□□□□ -0.56
LRP1-202ENST00000338962 RGS18Q9NS28 235 aa11.57□□□□□ -0.56
LRP1-202ENST00000338962 ABHD14A-ACY1A0A1B0GW23 586 aa11.56□□□□□ -0.56
LRP1-202ENST00000338962 MCF2LO15068 1137 aa11.56□□□□□ -0.56
LRP1-202ENST00000338962 MGEA5O60502 916 aa11.56□□□□□ -0.56
LRP1-202ENST00000338962 LSP1P33241 339 aa11.56□□□□□ -0.56
LRP1-202ENST00000338962 RDXP35241 583 aaKnown RBP11.56□□□□□ -0.56
LRP1-202ENST00000338962 MLH1P40692 756 aa11.56□□□□□ -0.56
LRP1-202ENST00000338962 SLCO1A2P46721 670 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms