RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 GNA15P30679 374 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 PLA2G4AP47712 749 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 TKTL1P51854 596 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ZNF132P52740 706 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 VCPP55072 806 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 BPIFB4P59827 614 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 PTK2Q05397 1052 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 USP4Q13107 963 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 RUNX3Q13761 415 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 KRT31Q15323 416 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ZNF77Q15935 545 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ANO6Q4KMQ2 910 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 CWF19L1Q69YN2 538 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 GPRIN1Q7Z2K8 1008 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 TTC30AQ86WT1 665 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 PJA1Q8NG27 643 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 FAM3CQ92520 227 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ZFYVE19Q96K21 471 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 FAM83CQ9BQN1 747 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 BPIFA3Q9BQP9 254 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 DDX23Q9BUQ8 820 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 VPS16Q9H269 839 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 LTB4R2Q9NPC1 389 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 SMPD4Q9NXE4 827 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 CLIC5Q9NZA1 410 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 TBC1D14Q9P2M4 693 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 SH3BP1Q9Y3L3 701 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 USP3Q9Y6I4 520 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 DENND4CQ5VZ89 1909 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 CACNA1BQ00975 2339 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 A0A1W2PQH9 124 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 THAP12O43422 761 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 RARGP13631 454 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 TPM4P67936 248 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 MEA1Q16626 185 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 RAB41Q5JT25 222 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 C10orf120Q5SQS8 335 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 GJB7Q6PEY0 223 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 KLHDC10Q6PID8 442 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 RSRC2Q7L4I2 434 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 ZNF276Q8N554 614 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 AOPEPQ8N6M6 819 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 TMEM105Q8N8V8 129 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 KCTD13Q8WZ19 329 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 TFAP2BQ92481 460 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 SHC3Q92529 594 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 GOLGA1Q92805 767 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 HSFY1Q96LI6 401 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 PCMTD1Q96MG8 357 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 LSM14BQ9BX40 385 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 FOXQ1Q9C009 403 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 EBF3Q9H4W6 596 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 CCSER2Q9H7U1 834 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 CYLDQ9NQC7 956 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 CNGB3Q9NQW8 809 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 GTSE1Q9NYZ3 720 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 CFAP97Q9P2B7 532 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 LIMA1Q9UHB6 759 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 DNMT3LQ9UJW3 386 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 LSM7Q9UK45 103 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 STRIP2Q9ULQ0 834 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 DAAM1Q9Y4D1 1078 aa11.91□□□□□ -0.5
SLC28A1-202ENST00000338602 TRIOO75962 3097 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 OBSL1O75147 1896 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 E2F8A0AVK6 867 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 SPECC1L-ADORA2AF8WAN1 911 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 SART1O43290 800 aaKnown RBP11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 GALR2O43603 387 aaPredicted RBP11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 FBXO21O94952 628 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 CAVIN2O95810 425 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 DCNP07585 359 aaKnown RBP11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 LCP1P13796 627 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 CD72P21854 359 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 ACADSBP45954 432 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 ZNF165P49910 485 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 COPB1P53618 953 aaKnown RBP11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 PTPN5P54829 565 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 SNX16P57768 344 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 YWHAGP61981 247 aaKnown RBP eCLIP11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 TNK2Q07912 1038 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 ADIGQ0VDE8 80 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 RAPGEF1Q13905 1077 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 LRRC32Q14392 662 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 PKDCCQ504Y2 493 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 IER5LQ5T953 404 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 KLHDC7AQ5VTJ3 777 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 BTBD8Q5XKL5 378 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 PM20D1Q6GTS8 502 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 DTWD2Q8NBA8 298 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 TTC8Q8TAM2 541 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 RNF139Q8WU17 664 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 SLC35F5Q8WV83 523 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 ZNF606Q8WXB4 792 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 SECISBP2LQ93073 1101 aaKnown RBP11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 OTUB2Q96DC9 234 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 ULBP1Q9BZM6 244 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 PDCL3Q9H2J4 239 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 ECT2Q9H8V3 914 aa11.9□□□□□ -0.5
SLC28A1-202ENST00000338602 PLCB1Q9NQ66 1216 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms