RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 DEFB119Q8N690 84 aa12.21□□□□□ -0.46
CSMD2-202ENST00000338325 TERB1Q8NA31 727 aa12.21□□□□□ -0.46
CSMD2-202ENST00000338325 B3GALNT2Q8NCR0 500 aa12.21□□□□□ -0.46
CSMD2-202ENST00000338325 GLIS3Q8NEA6 775 aa12.21□□□□□ -0.46
CSMD2-202ENST00000338325 DUSP9Q99956 384 aaKnown RBP12.21□□□□□ -0.46
CSMD2-202ENST00000338325 B3GNT5Q9BYG0 378 aa12.21□□□□□ -0.46
CSMD2-202ENST00000338325 SPHK2Q9NRA0 654 aa12.21□□□□□ -0.46
CSMD2-202ENST00000338325 CALCOCO1Q9P1Z2 691 aa12.21□□□□□ -0.46
CSMD2-202ENST00000338325 DEC1Q9P2X7 70 aa12.21□□□□□ -0.46
CSMD2-202ENST00000338325 ATP8B3O60423 1300 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 ADAMTS20P59510 1910 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 A8MXQ7 604 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 DLATP10515 647 aaKnown RBP12.2□□□□□ -0.46
CSMD2-202ENST00000338325 TNNI1P19237 187 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 NTSR1P30989 418 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 TUBP50607 506 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 ZNF33AQ06730 810 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 HNRNPDQ14103 355 aaKnown RBP12.2□□□□□ -0.46
CSMD2-202ENST00000338325 SNRNP35Q16560 246 aaKnown RBP12.2□□□□□ -0.46
CSMD2-202ENST00000338325 ANO4Q32M45 955 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 WDR72Q3MJ13 1102 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 SNX30Q5VWJ9 437 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 BBS7Q8IWZ6 715 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 CGRRF1Q99675 332 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 PANK2Q9BZ23 570 aa12.2□□□□□ -0.46
CSMD2-202ENST00000338325 IGHV1OR15-9A0A0B4J2B8 117 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 FAM221BA6H8Z2 402 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 ARHGAP33O14559 1287 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 EIF3DO15371 548 aaKnown RBP eCLIP12.19□□□□□ -0.46
CSMD2-202ENST00000338325 ZNF217O75362 1048 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 STAU1O95793 577 aaKnown RBP12.19□□□□□ -0.46
CSMD2-202ENST00000338325 SYPP08247 313 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 IRF1P10914 325 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 HOXD13P35453 343 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 WASP42768 502 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 FAM193AP78312 1265 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 CEBPZQ03701 1054 aaKnown RBP12.19□□□□□ -0.46
CSMD2-202ENST00000338325 PSMD6Q15008 389 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 ZNF423Q2M1K9 1284 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 RAB44Q7Z6P3 723 aaPredicted RBP12.19□□□□□ -0.46
CSMD2-202ENST00000338325 FAM35AQ86V20 835 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 SLC41A1Q8IVJ1 513 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 CHCHD4Q8N4Q1 142 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 RDH13Q8NBN7 331 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 HPS3Q969F9 1004 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 CCSER2Q9H7U1 834 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 DNAAF2Q9NVR5 837 aaKnown RBP12.19□□□□□ -0.46
CSMD2-202ENST00000338325 CHORDC1Q9UHD1 332 aaPredicted RBP12.19□□□□□ -0.46
CSMD2-202ENST00000338325 HCN2Q9UL51 889 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 STARD13Q9Y3M8 1113 aa12.19□□□□□ -0.46
CSMD2-202ENST00000338325 MORC2Q9Y6X9 1032 aaPredicted RBP12.19□□□□□ -0.46
CSMD2-202ENST00000338325 DSPP15924 2871 aaKnown RBP12.19□□□□□ -0.46
CSMD2-202ENST00000338325 A0A1W2PQD8 194 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 A0A1W2PQF6 199 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 ZBTB24O43167 697 aaPredicted RBP12.18□□□□□ -0.46
CSMD2-202ENST00000338325 CD59P13987 128 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 PDCP20941 246 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 SLC5A3P53794 718 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 CYP24A1Q07973 514 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 TRPC3Q13507 836 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 EGFLAMQ63HQ2 1017 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 GRAMD4Q6IC98 578 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 TMEM25Q86YD3 366 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 MIB1Q86YT6 1006 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 PDILTQ8N807 584 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 OR2I1PQ8NGU4 316 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 SCAMP5Q8TAC9 235 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 WBP2Q969T9 261 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 CCDC127Q96BQ5 260 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 HSPA12BQ96MM6 686 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 KCNK16Q96T55 309 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 MED10Q9BTT4 135 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 TNMDQ9H2S6 317 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 DMAP1Q9NPF5 467 aaPredicted RBP12.18□□□□□ -0.46
CSMD2-202ENST00000338325 AGPAT3Q9NRZ7 376 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 DNAJC17Q9NVM6 304 aaKnown RBP12.18□□□□□ -0.46
CSMD2-202ENST00000338325 COMMD8Q9NX08 183 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 IL37Q9NZH6 218 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 GMIPQ9P107 970 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 NXF1Q9UBU9 619 aaKnown RBP12.18□□□□□ -0.46
CSMD2-202ENST00000338325 CYP8B1Q9UNU6 501 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 NBEAQ8NFP9 2946 aa12.18□□□□□ -0.46
CSMD2-202ENST00000338325 FAM92AA1XBS5 289 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 TRIM24O15164 1050 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 ZDHHC11BP0C7U3 371 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 NDUFV2P19404 249 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 ATICP31939 592 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 CYP2J2P51589 502 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 MYL6P60660 151 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 SLC14A1Q13336 389 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 SDE2Q6IQ49 451 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 FAM173BQ6P4H8 233 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 EPM2AIP1Q7L775 607 aaPredicted RBP12.17□□□□□ -0.46
CSMD2-202ENST00000338325 PROSER1Q86XN7 944 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 CHPFQ8IZ52 775 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 TRIML1Q8N9V2 468 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 ZNF507Q8TCN5 953 aa12.17□□□□□ -0.46
CSMD2-202ENST00000338325 IPO4Q8TEX9 1081 aaKnown RBP12.17□□□□□ -0.46
CSMD2-202ENST00000338325 SYAP1Q96A49 352 aaPredicted RBP12.17□□□□□ -0.46
CSMD2-202ENST00000338325 SMARCD1Q96GM5 515 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms