RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ETNK2Q9NVF9 386 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 PPARGC1AQ9UBK2 798 aaKnown RBP17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 COL11A2P13942 1736 aaPredicted RBP17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 MYL2P10916 166 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 PDGFRAP16234 1089 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 UBA1P22314 1058 aaKnown RBP17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 EFNA5P52803 228 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 LAMTOR4Q0VGL1 99 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 BSPRYQ5W0U4 402 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 KIAA0319LQ8IZA0 1049 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 ZNF711Q9Y462 761 aa17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 MAFBQ9Y5Q3 323 aaPredicted RBP17.19■□□□□ 0.34
CDC42EP4-201ENST00000335793 SIGLEC16A6NMB1 481 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 C2CD2LO14523 706 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 B4GALT5O43286 388 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 SH3PXD2AQ5TCZ1 1133 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 CASC4Q6P4E1 433 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 BBS12Q6ZW61 710 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 ARL8BQ9NVJ2 186 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 GINS2Q9Y248 185 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 PEX11AO75192 247 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 ZBED1O96006 694 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 ITGB3P05106 788 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 ATP6V1C1P21283 382 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 GMPSP49915 693 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 BMPR2Q13873 1038 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 C15orf59Q2T9L4 293 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 RFWD3Q6PCD5 774 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 ADGRD1Q6QNK2 874 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 TMEM110Q86TL2 294 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 NAT8LQ8N9F0 302 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 MTMR14Q8NCE2 650 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 MIPOL1Q8TD10 442 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 ALKBH8Q96BT7 664 aaKnown RBP17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 PPCSQ9HAB8 311 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 ASNSD1Q9NWL6 643 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 TCRBV9S1A1TA0A576 114 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 RCN1Q15293 331 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 IGDCC3Q8IVU1 814 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 RNF168Q8IYW5 571 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 SEPT1Q8WYJ6 367 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 NSL1Q96IY1 281 aa17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 MYH9P35579 1960 aaKnown RBP17.18■□□□□ 0.34
CDC42EP4-201ENST00000335793 FAM237BA0A1B0GVD1 139 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 GM2AP17900 193 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 KDSRQ06136 332 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 ATF7IP2Q5U623 682 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 ZPBP2Q6X784 338 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 MECRQ9BV79 373 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 ZC3H7BQ9UGR2 993 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 PGAP2Q9UHJ9 254 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 TM9SF1O15321 606 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 ENO1P06733 434 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 TPBGLP0DKB5 382 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 KHDC1Q4VXA5 237 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 ANGEL2Q5VTE6 544 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 DSTYKQ6XUX3 929 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 TTC7BQ86TV6 843 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 SERAC1Q96JX3 654 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 DNAJC1Q96KC8 554 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 ACO2Q99798 780 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 TMEM134Q9H6X4 195 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 CYTH4Q9UIA0 394 aa17.17■□□□□ 0.34
CDC42EP4-201ENST00000335793 KRT37O76014 449 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 ERBB2P04626 1255 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 ZNF132P52740 706 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 BCAR1P56945 870 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 MAP3K10Q02779 954 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 SURF1Q15526 300 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 LGSNQ5TDP6 509 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 EEF1DP3Q658K8 133 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 ARID3BQ8IVW6 561 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 PPFIBP2Q8ND30 876 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 FAM161BQ96MY7 647 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 VPS11Q9H270 941 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 SMYD3Q9H7B4 428 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 ATXN10Q9UBB4 475 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 STOML1Q9UBI4 398 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 FARP1Q9Y4F1 1045 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 APOC4-APOC2K7ER74 178 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 APOC2P02655 101 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 CLCN3P51790 818 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 ISLR2Q6UXK2 745 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 TMEM192Q8IY95 271 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 ARFGAP1Q8N6T3 406 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 ACAP3Q96P50 834 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 RSAD1Q9HA92 442 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 PHF24Q9UPV7 400 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 CNTN6Q9UQ52 1028 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 LOXHD1Q8IVV2 1947 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 MSCO60682 206 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 BAG2O95816 211 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 SLC25A11Q02978 314 aaKnown RBP17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 ENPEPQ07075 957 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 KPNB1Q14974 876 aaKnown RBP17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 MROH9Q5TGP6 573 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 POLNQ7Z5Q5 900 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 MAP7D3Q8IWC1 876 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 BANPQ8N9N5 519 aa17.16■□□□□ 0.34
CDC42EP4-201ENST00000335793 CFAP61Q8NHU2 1237 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms