RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 VPS37BQ9H9H4 285 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 UBN1Q9NPG3 1134 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 KRT82Q9NSB4 513 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 hCG_1818297A0A087WSY0 165 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 M0QYV0 167 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 LRCH4O75427 683 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 ADCYAP1R1P41586 468 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 CDKN2BP42772 138 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 RASSF2P50749 326 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 OVGP1Q12889 678 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 MMRN1Q13201 1228 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 DNAJC14Q6Y2X3 702 aaPredicted RBP14.47□□□□□ -0.09
SF1-202ENST00000334944 ARMCX2Q7L311 632 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 ACTL9Q8TC94 416 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 PRR11Q96HE9 360 aaPredicted RBP14.47□□□□□ -0.09
SF1-202ENST00000334944 LPIN3Q9BQK8 851 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 SMARCAD1Q9H4L7 1026 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.47□□□□□ -0.09
SF1-202ENST00000334944 WDR91A4D1P6 747 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 DESP17661 470 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 MAN1A1P33908 653 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 GJA5P36382 358 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 CETN2P41208 172 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 CPA2P48052 419 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 RGS7P49802 495 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 TNFAIP8L3Q5GJ75 292 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 TFDP3Q5H9I0 405 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 WASHC2DQ5SRD0 308 aa14.47□□□□□ -0.09
SF1-202ENST00000334944 CFAP69A5D8W1 941 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 USP1O94782 785 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 C22orf31O95567 290 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 PROZP22891 400 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 OTUD4Q01804 1114 aaKnown RBP14.46□□□□□ -0.09
SF1-202ENST00000334944 TMED1Q13445 227 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.46□□□□□ -0.09
SF1-202ENST00000334944 ANKRD22Q5VYY1 191 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 MAP1SQ66K74 1059 aaPredicted RBP14.46□□□□□ -0.09
SF1-202ENST00000334944 CCDC33Q8N5R6 958 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 SLC4A11Q8NBS3 891 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 NLRP7Q8WX94 980 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 AZIN2Q96A70 460 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 HES2Q9Y543 173 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 MAP3K7O43318 606 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 OPHN1O60890 802 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 HNRNPCP07910 306 aaKnown RBP eCLIP14.46□□□□□ -0.091e-11■□□□□ 8.2
SF1-202ENST00000334944 ARF4P18085 180 aaPredicted RBP14.46□□□□□ -0.09
SF1-202ENST00000334944 SERPINB3P29508 390 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 MOGSQ13724 837 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 TFDP1Q14186 410 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 AMHR2Q16671 573 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 NPNTQ6UXI9 565 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 PLPPR4Q7Z2D5 763 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 SDCCAG8Q86SQ7 713 aaPredicted RBP14.46□□□□□ -0.09
SF1-202ENST00000334944 APLFQ8IW19 511 aaPredicted RBP14.46□□□□□ -0.09
SF1-202ENST00000334944 C4orf33Q8N1A6 199 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 PPFIBP2Q8ND30 876 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 MPP4Q96JB8 637 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 C2orf40Q9H1Z8 148 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 NPHS2Q9NP85 383 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 HSFX1Q9UBD0 423 aa14.46□□□□□ -0.09
SF1-202ENST00000334944 DNAJC25-GNG10A0A024R161 153 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 EXOC1LA0A1B0GW35 172 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 HCRTO43612 131 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 BAG2O95816 211 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 LGALS2P05162 132 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 EIF4BP23588 611 aaKnown RBP14.45□□□□□ -0.1
SF1-202ENST00000334944 THOC5Q13769 683 aaKnown RBP14.45□□□□□ -0.1
SF1-202ENST00000334944 TTLL4Q14679 1199 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 EFTUD2Q15029 972 aaKnown RBP eCLIP14.45□□□□□ -0.16e-8■■■■■ 29
SF1-202ENST00000334944 C15orf59Q2T9L4 293 aaPredicted RBP14.45□□□□□ -0.1
SF1-202ENST00000334944 LIN52Q52LA3 116 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 MFSD5Q6N075 450 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 IZUMO2Q6UXV1 221 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 ANKRD23Q86SG2 305 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 MAGEB18Q96M61 343 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 TMEM109Q9BVC6 243 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 DDX18Q9NVP1 670 aaKnown RBP14.45□□□□□ -0.1
SF1-202ENST00000334944 ZFP69BQ9UJL9 534 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 RASA4BC9J798 803 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 RASA4O43374 803 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 HBP1O60381 514 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 MICAL2O94851 1124 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 LSM8O95777 96 aaKnown RBP14.45□□□□□ -0.1
SF1-202ENST00000334944 AMPD1P23109 780 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 SLC34A1Q06495 639 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 PDIA2Q13087 525 aaKnown RBP14.45□□□□□ -0.1
SF1-202ENST00000334944 SLC10A6Q3KNW5 377 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 GLRA4Q5JXX5 417 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 FAM102AQ5T9C2 384 aaPredicted RBP14.45□□□□□ -0.1
SF1-202ENST00000334944 SYDE1Q6ZW31 735 aaPredicted RBP14.45□□□□□ -0.1
SF1-202ENST00000334944 ALLCQ8N6M5 410 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 SERPINB12Q96P63 405 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 TTC1Q99614 292 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 FAM49AQ9H0Q0 323 aaPredicted RBP14.45□□□□□ -0.1
SF1-202ENST00000334944 GPATCH2LQ9NWQ4 482 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 ERAP1Q9NZ08 941 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 OTOFQ9HC10 1997 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 TCRBV7S3A2A0A539 114 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 B4GALT4O60513 344 aa14.45□□□□□ -0.1
SF1-202ENST00000334944 STK10O94804 968 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms