RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PEX2P28328 305 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 USP46P62068 366 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 PDE1BQ01064 536 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 ZNF252P-AS1Q0IIN9 211 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 DLG1Q12959 904 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 PIGHQ14442 188 aaPredicted RBP14.27□□□□□ -0.13
SYNE3-201ENST00000334258 ZACNQ401N2 412 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 TMCO4Q5TGY1 634 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 LRRC38Q5VT99 294 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 TTC39BQ5VTQ0 682 aaPredicted RBP14.27□□□□□ -0.13
SYNE3-201ENST00000334258 OLFML2BQ68BL8 750 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 SLC26A11Q86WA9 606 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 TTC13Q8NBP0 860 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 FBXL18Q96ME1 805 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 APOBEC3GQ9HC16 384 aaKnown RBP14.27□□□□□ -0.13
SYNE3-201ENST00000334258 POLIQ9UNA4 740 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 PLA2G4CQ9UP65 541 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 ZNF541Q9H0D2 1346 aa14.27□□□□□ -0.13
SYNE3-201ENST00000334258 STAM2O75886 525 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 SLC18A2Q05940 514 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
SYNE3-201ENST00000334258 DARS2Q6PI48 645 aaKnown RBP14.26□□□□□ -0.13
SYNE3-201ENST00000334258 SDCCAG8Q86SQ7 713 aaPredicted RBP14.26□□□□□ -0.13
SYNE3-201ENST00000334258 LCA5Q86VQ0 697 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 EFCAB3Q8N7B9 438 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 FAM172AQ8WUF8 416 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 DNAJC1Q96KC8 554 aaKnown RBP14.26□□□□□ -0.13
SYNE3-201ENST00000334258 IMPG2Q9BZV3 1241 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 DEFB129Q9H1M3 183 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 AGO4Q9HCK5 861 aaKnown RBP14.26□□□□□ -0.13
SYNE3-201ENST00000334258 GPAMQ9HCL2 828 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 LOC100653049A0A140TA62 436 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 MCF2LO15068 1137 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 KRT34O76011 436 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 FAM200BP0CF97 657 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 UQCRBP14927 111 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 ACO1P21399 889 aaKnown RBP14.26□□□□□ -0.13
SYNE3-201ENST00000334258 STX3Q13277 289 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 RALGPS1Q5JS13 557 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 PDSS2Q86YH6 399 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 KCTD6Q8NC69 237 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 FAF2Q96CS3 445 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 SLX1AQ9BQ83 275 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 DNAJB4Q9UDY4 337 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 PABPC4LP0CB38 370 aaKnown RBP14.26□□□□□ -0.13
SYNE3-201ENST00000334258 PDK3Q15120 406 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 HSF5Q4G112 596 aaPredicted RBP14.26□□□□□ -0.13
SYNE3-201ENST00000334258 WDR75Q8IWA0 830 aaKnown RBP14.26□□□□□ -0.13
SYNE3-201ENST00000334258 NDUFAF2Q8N183 169 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 TMEM35BQ8NCS4 154 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 ICA1LQ8NDH6 482 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 TRPM4Q8TD43 1214 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 HSPH1Q92598 858 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 WNK4Q96J92 1243 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 C7orf26Q96N11 449 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 HAPLN3Q96S86 360 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 CNTN3Q9P232 1028 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 PLLPQ9Y342 182 aa14.26□□□□□ -0.13
SYNE3-201ENST00000334258 TESPA1A2RU30 521 aaPredicted RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 FUT4P22083 530 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 STIP1P31948 543 aaKnown RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 NLRP11P59045 1033 aaKnown RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 NCOA4Q13772 614 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 DPYSL3Q14195 570 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 HADHQ16836 314 aaKnown RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 MROH9Q5TGP6 573 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 DENND5BQ6ZUT9 1274 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 C4orf19Q8IY42 314 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 STKLD1Q8NE28 680 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 SPATA18Q8TC71 538 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 NCSTNQ92542 709 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 GCNAQ96QF7 691 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 DDX18Q9NVP1 670 aaKnown RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 TMCO1Q9UM00 188 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 NUB1Q9Y5A7 615 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 NFIBO00712 420 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 BUD23O43709 281 aaKnown RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 PROCP04070 461 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 CAP2P40123 477 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 TCHHL1Q5QJ38 904 aaPredicted RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 SH2D4BQ5SQS7 431 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 COL20A1Q9P218 1284 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 PHF24Q9UPV7 400 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 APOBEC2Q9Y235 224 aaKnown RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 MAD1L1Q9Y6D9 718 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 A0A088AWK7 358 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 E7ESA3 106 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 H7C0C1 242 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 KLF11O14901 512 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 ZNF862O60290 1169 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 SORBS2O94875 1100 aaKnown RBP14.25□□□□□ -0.13
SYNE3-201ENST00000334258 SERPINA6P08185 405 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 CD48P09326 243 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 GRIA2P42262 883 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 ATP5OP48047 213 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 WNT7BP56706 349 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 MAP3K10Q02779 954 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 FAXCQ5TGI0 409 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 AAGABQ6PD74 315 aa14.25□□□□□ -0.13
SYNE3-201ENST00000334258 SLC16A10Q8TF71 515 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms