RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 HIF3AQ9Y2N7 669 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RTL9Q8NET4 1388 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCDC163A0A0D9SF12 145 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 A8MUA0 341 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 WDR64B1ANS9 1081 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 WWP2O00308 870 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PGRMC2O15173 223 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 LBRQ14739 615 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TBCELQ5QJ74 424 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PLA2G4DQ86XP0 818 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 COG1Q8WTW3 980 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SIPA1Q96FS4 1042 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 VPS35Q96QK1 796 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PCYT2Q99447 389 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TPPP3Q9BW30 176 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SCAF11Q99590 1463 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PDE2AO00408 941 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ALDH4A1P30038 563 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SERPINF1P36955 418 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SERPINB9P50453 376 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TMBIM6P55061 237 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 OSTNP61366 133 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ADAM17P78536 824 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 GNA12Q03113 381 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 MZT2AQ6P582 158 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ADCK2Q7Z695 626 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 DPP10Q8N608 796 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 OR10R2Q8NGX6 335 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 EYA3Q99504 573 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PRMT1Q99873 361 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 LRRC1Q9BTT6 524 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SMYD3Q9H7B4 428 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RAB23Q9ULC3 237 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SORCS3Q9UPU3 1222 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RAD54BQ9Y620 910 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 C15orf38-AP3S2A0A0A6YYH1 394 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 H0Y8G0 127 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 C6orf229H3BNL8 230 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF862O60290 1169 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SASH3O75995 380 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 NDUFA10O95299 355 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RFC4P35249 363 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ETFBP38117 255 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 MAPK10P53779 464 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 HIRAP54198 1017 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 VSNL1P62760 191 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ECT2LQ008S8 904 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 XRCC4Q13426 336 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SLC15A2Q16348 729 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 HSDL1Q3SXM5 330 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ANKDD1AQ495B1 522 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TBC1D9Q6ZT07 1266 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 GUF1Q8N442 669 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAR1Q8WVX9 515 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 MED30Q96HR3 178 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PLEKHA8Q96JA3 519 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM111AQ96PZ2 611 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 FMO2Q99518 471 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SUCNR1Q9BXA5 334 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ACAD8Q9UKU7 415 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 CORO2BQ9UQ03 480 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 MGAT4BQ9UQ53 548 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SCN1AP35498 2009 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF14P17017 642 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCNOP22674 350 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CHAF1BQ13112 559 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 MPP3Q13368 585 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 BTG3Q14201 252 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 ARHGEF19Q8IW93 802 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATG4AQ8WYN0 398 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 OXCT2Q9BYC2 517 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 BLZF1Q9H2G9 400 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 AMACRQ9UHK6 382 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 XPO7Q9UIA9 1087 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 GNAT3A8MTJ3 354 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 IFRD1O00458 451 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 PCDHGA12O60330 932 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 HOXD8P13378 290 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 SCN1BQ07699 218 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 PDIA2Q13087 525 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 SMU1Q2TAY7 513 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 LDHAL6AQ6ZMR3 332 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CMTR2Q8IYT2 770 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 OR2M2Q96R28 347 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CHP1Q99653 195 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 REXO4Q9GZR2 422 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 NOD2Q9HC29 1040 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 C1orf196B1AJZ1 125 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 GGPS1O95749 300 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZSCAN22P10073 491 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 BTDP43251 543 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 PRKCZQ05513 592 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 NOMO2Q5JPE7 1267 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 IZUMO2Q6UXV1 221 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 NOC4LQ9BVI4 516 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 LRRC40Q9H9A6 602 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 PCDHA11Q9Y5I1 949 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 ABCC11Q96J66 1382 aa6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 SCAMP3O14828 347 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-201ENST00000334218 CLOCKO15516 846 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms