RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 RFC1P35251 1148 aaPredicted RBP17.34■□□□□ 0.37
SHOX-201ENST00000334060 ALDH1A3P47895 512 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 VAV2P52735 878 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 MRPS5P82675 430 aaKnown RBP17.34■□□□□ 0.37
SHOX-201ENST00000334060 CYP4F8P98187 520 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 C1QBPQ07021 282 aaKnown RBP17.34■□□□□ 0.37
SHOX-201ENST00000334060 SPA17Q15506 151 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 PPM1LQ5SGD2 360 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 PPP1R15BQ5SWA1 713 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 LIN9Q5TKA1 542 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 OTUD1Q5VV17 481 aaPredicted RBP17.34■□□□□ 0.37
SHOX-201ENST00000334060 SIX6OS1Q8N1H7 587 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 HSFY1Q96LI6 401 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 SLC22A12Q96S37 553 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 CORO1BQ9BR76 489 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 NCANO14594 1321 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 C2orf78A6NCI8 922 aa17.33■□□□□ 0.37
SHOX-201ENST00000334060 TUFMP49411 452 aaKnown RBP17.33■□□□□ 0.37
SHOX-201ENST00000334060 SMARCB1Q12824 385 aa17.33■□□□□ 0.37
SHOX-201ENST00000334060 RARS2Q5T160 578 aaKnown RBP17.33■□□□□ 0.37
SHOX-201ENST00000334060 PDE12Q6L8Q7 609 aaKnown RBP17.33■□□□□ 0.37
SHOX-201ENST00000334060 GRASPQ7Z6J2 395 aaPredicted RBP17.33■□□□□ 0.37
SHOX-201ENST00000334060 STK32AQ8WU08 396 aa17.33■□□□□ 0.37
SHOX-201ENST00000334060 FAM149B1Q96BN6 582 aa17.33■□□□□ 0.37
SHOX-201ENST00000334060 SPATA17Q96L03 361 aa17.33■□□□□ 0.37
SHOX-201ENST00000334060 CFAP57Q96MR6 1250 aa17.33■□□□□ 0.37
SHOX-201ENST00000334060 NUP85Q9BW27 656 aa17.33■□□□□ 0.37
SHOX-201ENST00000334060 IL37Q9NZH6 218 aa17.33■□□□□ 0.37
SHOX-201ENST00000334060 TMEM59LQ9UK28 342 aa17.33■□□□□ 0.37
SHOX-201ENST00000334060 ANKRD62A6NC57 917 aa17.33■□□□□ 0.36
SHOX-201ENST00000334060 MOSPD3O75425 235 aa17.33■□□□□ 0.36
SHOX-201ENST00000334060 CYP1A2P05177 515 aa17.33■□□□□ 0.36
SHOX-201ENST00000334060 C15orf59Q2T9L4 293 aaPredicted RBP17.33■□□□□ 0.36
SHOX-201ENST00000334060 PLEKHA7Q6IQ23 1121 aa17.33■□□□□ 0.36
SHOX-201ENST00000334060 SLC35G2Q8TBE7 412 aa17.33■□□□□ 0.36
SHOX-201ENST00000334060 FBXO32Q969P5 355 aa17.33■□□□□ 0.36
SHOX-201ENST00000334060 PSMG2Q969U7 264 aa17.33■□□□□ 0.36
SHOX-201ENST00000334060 CCSER2Q9H7U1 834 aa17.33■□□□□ 0.36
SHOX-201ENST00000334060 CLDND1Q9NY35 253 aa17.33■□□□□ 0.36
SHOX-201ENST00000334060 CAPN6Q9Y6Q1 641 aa17.33■□□□□ 0.36
SHOX-201ENST00000334060 FANCGO15287 622 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 MOCS3O95396 460 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 LRG1P02750 347 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 TMEM253P0C7T8 217 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 SLC8A3P57103 927 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 RPL10AP62906 217 aaKnown RBP17.32■□□□□ 0.36
SHOX-201ENST00000334060 SLC6A3Q01959 620 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 PM20D1Q6GTS8 502 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 KIAA1328Q86T90 577 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 KIAA1524Q8TCG1 905 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 IPO4Q8TEX9 1081 aaKnown RBP17.32■□□□□ 0.36
SHOX-201ENST00000334060 ING5Q8WYH8 240 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 MAGEB5Q9BZ81 275 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 TMPRSS4Q9NRS4 437 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 GUCA1BQ9UMX6 200 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 OBSL1O75147 1896 aa17.32■□□□□ 0.36
SHOX-201ENST00000334060 TMEM265A0A087WTH1 108 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 A0A1W2PRU2 124 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 FAM92AA1XBS5 289 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 H3BQ06 376 aaPredicted RBP17.31■□□□□ 0.36
SHOX-201ENST00000334060 SCAMP3O14828 347 aaKnown RBP17.31■□□□□ 0.36
SHOX-201ENST00000334060 MYL4P12829 197 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 YWHAQP27348 245 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 GPC5P78333 572 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 ADAM15Q13444 863 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 DNAJC24Q6P3W2 148 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 DEFB106AQ8N104 65 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 ARFGAP1Q8N6T3 406 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 EFHBQ8N7U6 833 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 C3orf20Q8ND61 904 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 CYP2S1Q96SQ9 504 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 TTLL2Q9BWV7 592 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 SMG9Q9H0W8 520 aaKnown RBP17.31■□□□□ 0.36
SHOX-201ENST00000334060 PNPLA8Q9NP80 782 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 CTTNBP2NLQ9P2B4 639 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 SYNJ2BP-COX16A0A087WUM0 186 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 SPDYE4A6NLX3 237 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 TMEM110-MUSTN1A8MSY1 372 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 MSI1O43347 362 aaKnown RBP17.31■□□□□ 0.36
SHOX-201ENST00000334060 EPHB3P54753 998 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 ZXDBP98169 803 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 BSPRYQ5W0U4 402 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 TXNDC8Q6A555 127 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 CCAR2Q8N163 923 aaKnown RBP17.31■□□□□ 0.36
SHOX-201ENST00000334060 ITFG1Q8TB96 612 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 CTNNBL1Q8WYA6 563 aaPredicted RBP17.31■□□□□ 0.36
SHOX-201ENST00000334060 WBP2Q969T9 261 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 NOX5Q96PH1 765 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 UBXN6Q9BZV1 441 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 PRDM6Q9NQX0 595 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 MTMR10Q9NXD2 777 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 COX16Q9P0S2 106 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 SFMBT1Q9UHJ3 866 aa17.31■□□□□ 0.36
SHOX-201ENST00000334060 F11P03951 625 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 CALB1P05937 261 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 RHOP08100 348 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 CCDC175P0C221 793 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 GABRR2P28476 465 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 YWHAGP61981 247 aaKnown RBP eCLIP17.3■□□□□ 0.36
SHOX-201ENST00000334060 CBX2Q14781 532 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms