RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PCDHGC3Q9UN70 934 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 PPME1Q9Y570 386 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 A0A1B0GVG6 124 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 MIPP30301 263 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 NAMPTP43490 491 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 FAXCQ5TGI0 409 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 C20orf27Q9GZN8 174 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 PORCNQ9H237 461 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 RNF146Q9NTX7 359 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 ZC3H7BQ9UGR2 993 aaKnown RBP24.55■■□□□ 1.52
TSKU-201ENST00000333090 KCNG1Q9UIX4 513 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 TTLL13PA6NNM8 815 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 UGT1A9O60656 530 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 ABHD15Q6UXT9 468 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 ZCCHC23Q6ZST2 131 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 SHKBP1Q8TBC3 707 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 LPAR1Q92633 364 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 EBF4Q9BQW3 602 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 CCDC106Q9BWC9 280 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 UGT1A7Q9HAW7 530 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 UGT1A10Q9HAW8 530 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 UGT1A8Q9HAW9 530 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 PCMTD2Q9NV79 361 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 SIRPGQ9P1W8 387 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 H7C0C1 242 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 CRABP2P29373 138 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 STIP1P31948 543 aaKnown RBP24.54■■□□□ 1.52
TSKU-201ENST00000333090 ATP5OP48047 213 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 YWHAZP63104 245 aaKnown RBP24.54■■□□□ 1.52
TSKU-201ENST00000333090 LRRC36Q1X8D7 754 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 TEX44Q53QW1 395 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 ANGEL2Q5VTE6 544 aaKnown RBP24.54■■□□□ 1.52
TSKU-201ENST00000333090 GSTCDQ8NEC7 633 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 WNK4Q96J92 1243 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 GORASP1Q9BQQ3 440 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 RNF8O76064 485 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 C1QAP02745 245 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 TRPC3Q13507 836 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 RAPH1Q70E73 1250 aa24.54■■□□□ 1.52
TSKU-201ENST00000333090 HBS1LQ9Y450 684 aaKnown RBP24.54■■□□□ 1.52
TSKU-201ENST00000333090 DOCK5Q9H7D0 1870 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 ARHGAP42A6NI28 874 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 MAFGO15525 162 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 RFPL1O75677 317 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 CUL3Q13618 768 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 CFAP157Q5JU67 520 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 LGSNQ5TDP6 509 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 WDR78Q5VTH9 848 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 BRSK2Q8IWQ3 736 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 CMASQ8NFW8 434 aaPredicted RBP24.53■■□□□ 1.52
TSKU-201ENST00000333090 CPXM1Q96SM3 734 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 USP18Q9UMW8 372 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 WNT10BO00744 389 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 YWHAEP62258 255 aaKnown RBP24.53■■□□□ 1.52
TSKU-201ENST00000333090 IRX4P78413 519 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 WDR49Q8IV35 697 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 FNIP1Q8TF40 1166 aa24.53■■□□□ 1.52
TSKU-201ENST00000333090 DPEP1P16444 411 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 ORC1Q13415 861 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 C1orf228Q6PIY5 440 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 ZNF526Q8TF50 670 aaPredicted RBP24.52■■□□□ 1.52
TSKU-201ENST00000333090 SLC7A3Q8WY07 619 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 EBF3Q9H4W6 596 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 RSAD1Q9HA92 442 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 PNPLA8Q9NP80 782 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 SMYD2Q9NRG4 433 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 NXF1Q9UBU9 619 aaKnown RBP24.52■■□□□ 1.52
TSKU-201ENST00000333090 CHADO15335 359 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 RNASEH1O60930 286 aaKnown RBP24.52■■□□□ 1.52
TSKU-201ENST00000333090 CDH6P55285 790 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 TFAMQ00059 246 aaKnown RBP24.52■■□□□ 1.52
TSKU-201ENST00000333090 MTMR2Q13614 643 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 NOMO1Q15155 1222 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 ZNF699Q32M78 642 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 CNPY1Q3B7I2 92 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 XRRA1Q6P2D8 792 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 NDUFAF2Q8N183 169 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 TTLL6Q8N841 843 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 PYDC1Q8WXC3 89 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 SMYD3Q9H7B4 428 aa24.52■■□□□ 1.52
TSKU-201ENST00000333090 ATG7O95352 703 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 TOP3BO95985 862 aaKnown RBP24.51■■□□□ 1.51
TSKU-201ENST00000333090 SERPINA6P08185 405 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 SLC25A3Q00325 362 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 MROH9Q5TGP6 573 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 PPP2R3CQ969Q6 453 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 TRIM56Q9BRZ2 755 aaKnown RBP24.51■■□□□ 1.51
TSKU-201ENST00000333090 POPDC2Q9HBU9 364 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.51■■□□□ 1.51
TSKU-201ENST00000333090 DNAJB4Q9UDY4 337 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 ZNF180Q9UJW8 692 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 SOX13Q9UN79 622 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 KIAA1217Q5T5P2 1943 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.51■■□□□ 1.51
TSKU-201ENST00000333090 C6orf222P0C671 652 aaPredicted RBP24.51■■□□□ 1.51
TSKU-201ENST00000333090 ATG4CQ96DT6 458 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 SPATA16Q9BXB7 569 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 GPAMQ9HCL2 828 aa24.51■■□□□ 1.51
TSKU-201ENST00000333090 KCNN4O15554 427 aa24.5■■□□□ 1.51
TSKU-201ENST00000333090 MAP3K6O95382 1288 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms