RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ARL4AP40617 200 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 PITX1P78337 314 aaPredicted RBP16.57■□□□□ 0.24
PDGFB-201ENST00000331163 GRIK3Q13003 919 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 MTMR3Q13615 1198 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 LRRC26Q2I0M4 334 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 CLLU1OSQ5K130 101 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 SWT1Q5T5J6 900 aaKnown RBP16.57■□□□□ 0.24
PDGFB-201ENST00000331163 FBXO46Q6PJ61 603 aaPredicted RBP16.57■□□□□ 0.24
PDGFB-201ENST00000331163 HFE2Q6ZVN8 426 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 RPAINQ86UA6 219 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 NLRP14Q86W24 1093 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 LRRC52Q8N7C0 313 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 CNTN3Q9P232 1028 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 USP18Q9UMW8 372 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 PLXNB2O15031 1838 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 TRDMT1O14717 391 aaKnown RBP16.57■□□□□ 0.24
PDGFB-201ENST00000331163 PROSCO94903 275 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 ZSCAN5DPP0CG00 497 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 SKIP12755 728 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 LHX1P48742 406 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 CTCFP49711 727 aaPredicted RBP16.57■□□□□ 0.24
PDGFB-201ENST00000331163 DPY19L2P1Q6NXN4 242 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 NPNTQ6UXI9 565 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 TMEM173Q86WV6 379 aaPredicted RBP16.57■□□□□ 0.24
PDGFB-201ENST00000331163 CCDC13Q8IYE1 715 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 USP38Q8NB14 1042 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 WHAMMQ8TF30 809 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 TMEM121Q9BTD3 319 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 CHST7Q9NS84 486 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 PLAAQ9Y263 795 aa16.57■□□□□ 0.24
PDGFB-201ENST00000331163 PJA2O43164 708 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 PIAS1O75925 651 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 GAS8O95995 478 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 UNGP13051 313 aaPredicted RBP16.56■□□□□ 0.24
PDGFB-201ENST00000331163 OGDHQ02218 1023 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 CENPCQ03188 943 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 WDTC1Q8N5D0 677 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 WNT8AQ9H1J5 351 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 ALG13Q9NP73 1137 aaKnown RBP16.56■□□□□ 0.24
PDGFB-201ENST00000331163 PCDHGC5Q9Y5F6 944 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 TTC3P53804 2025 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 F5P12259 2224 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 TBX18O95935 607 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 HOXD8P13378 290 aaPredicted RBP16.56■□□□□ 0.24
PDGFB-201ENST00000331163 NPR3P17342 541 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 CPLX4Q7Z7G2 160 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 FAM35AQ86V20 835 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 HOOK3Q86VS8 718 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 BADQ92934 168 aa16.56■□□□□ 0.24
PDGFB-201ENST00000331163 CELF6Q96J87 481 aaKnown RBP16.56■□□□□ 0.24
PDGFB-201ENST00000331163 MIF4GDA9UHW6 222 aaKnown RBP16.55■□□□□ 0.24
PDGFB-201ENST00000331163 ACSL3O95573 720 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 ETS1P14921 441 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 FAM126BQ8IXS8 530 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 FUKQ8N0W3 1084 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 CNPY4Q8N129 248 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 PYROXD2Q8N2H3 581 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 DEPDC1BQ8WUY9 529 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 NRDE2Q9H7Z3 1164 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 CHUKO15111 745 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 PAPSS1O43252 624 aaPredicted RBP16.55■□□□□ 0.24
PDGFB-201ENST00000331163 LPXNO60711 386 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 ENDOD1O94919 500 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 PAEPP09466 180 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 MYBL1P10243 752 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 GPD2P43304 727 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 SLC11A1P49279 550 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 PRMT2P55345 433 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 MAP3K21Q5TCX8 1036 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 MON1BQ7L1V2 547 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 MAP7D3Q8IWC1 876 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 RSPH1Q8WYR4 309 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 SLC40A1Q9NP59 571 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 ENTPD7Q9NQZ7 604 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 BRWD1Q9NSI6 2320 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 B4GALT3O60512 393 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 ECEL1O95672 775 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 CYP3A5P20815 502 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 C1QBPQ07021 282 aaKnown RBP16.55■□□□□ 0.24
PDGFB-201ENST00000331163 FAAP100Q0VG06 881 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 AP1B1Q10567 949 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 VARS2Q5ST30 1063 aaKnown RBP16.55■□□□□ 0.24
PDGFB-201ENST00000331163 TFAP2DQ7Z6R9 452 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 MYCBPAPQ8TBZ2 947 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 FBXO32Q969P5 355 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 DDX27Q96GQ7 796 aaKnown RBP16.55■□□□□ 0.24
PDGFB-201ENST00000331163 PWWP2AQ96N64 755 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 ADAM28Q9UKQ2 775 aa16.55■□□□□ 0.24
PDGFB-201ENST00000331163 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.54■□□□□ 0.24
PDGFB-201ENST00000331163 EMBQ6PCB8 327 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 SH3GL2Q99962 352 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 EPN3Q9H201 632 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 CRTAC1Q9NQ79 661 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.54■□□□□ 0.24
PDGFB-201ENST00000331163 STAP1Q9ULZ2 295 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 YJEFN3A6XGL0 299 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 E7ENQ6 273 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 RARAP10276 462 aa16.54■□□□□ 0.24
PDGFB-201ENST00000331163 YWHAZP63104 245 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms