RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 TCF15Q12870 199 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 DUSP4Q13115 394 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 CUL4BQ13620 913 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 MLF2Q15773 248 aaPredicted RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 SLC39A12Q504Y0 691 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 ARHGAP15Q53QZ3 475 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 FAM171BQ6P995 826 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 VSTM1Q6UX27 236 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 C4orf50Q6ZRC1 276 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 CBWD2Q8IUF1 395 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 MFSD6LQ8IWD5 586 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 RGL4Q8IZJ4 473 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 GUF1Q8N442 669 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 TMEM105Q8N8V8 129 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 GLIS3Q8NEA6 775 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 RSAD2Q8WXG1 361 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 TAF4BQ92750 862 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 SYAP1Q96A49 352 aaPredicted RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 FAXDC2Q96IV6 333 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 MYRFLQ96LU7 910 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 FAM129BQ96TA1 746 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 IKZF4Q9H2S9 585 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 KCTD10Q9H3F6 313 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 PCIF1Q9H4Z3 704 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 KIF9Q9HAQ2 790 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 EHD2Q9NZN4 543 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 RAPGEFL1Q9UHV5 662 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 CDH9Q9ULB4 789 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 L1RE1Q9UN81 338 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 MRPS17Q9Y2R5 130 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 TIMM13Q9Y5L4 95 aaPredicted RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 KCNMB2Q9Y691 235 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 KANSL1LA0AUZ9 987 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 GOLGA8IPA6NC78 632 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 A6NHS1 94 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 GOLGA8JA6NMD2 632 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 MAN2B1O00754 1011 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 CHADO15335 359 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 NCAM2O15394 837 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 NDUFB5O43674 189 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 NOL4O94818 638 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 PDGFBP01127 241 aaPredicted RBP6.77□□□□□ -1.33
SMG1-201ENST00000330588 RPN1P04843 607 aaKnown RBP6.77□□□□□ -1.33
SMG1-201ENST00000330588 OR4Q2P0C623 313 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 TCF3P15923 654 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 PSMC3P17980 439 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 NBL1P41271 181 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 CCR2P41597 374 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 AFMP43652 599 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 PPP3CCP48454 512 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 FCHO2Q0JRZ9 810 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 BFSP1Q12934 665 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 ZNF268Q14587 947 aaPredicted RBP6.77□□□□□ -1.33
SMG1-201ENST00000330588 SOWAHAQ2M3V2 549 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 EDRF1Q3B7T1 1238 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 SLC44A4Q53GD3 710 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 FAM78AQ5JUQ0 283 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 FOXR2Q6PJQ5 311 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 KRBA2Q6ZNG9 492 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 Q6ZS46 218 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 TRAPPC11Q7Z392 1133 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 DNAJB7Q7Z6W7 309 aaPredicted RBP6.77□□□□□ -1.33
SMG1-201ENST00000330588 ADGRF2Q8IZF7 708 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 DTWD2Q8NBA8 298 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 ATAD1Q8NBU5 361 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 KIAA0895Q8NCT3 520 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 ZSWIM2Q8NEG5 633 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 PJA1Q8NG27 643 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 SHKBP1Q8TBC3 707 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 PARD3BQ8TEW8 1205 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 FOXD4L4Q8WXT5 416 aaPredicted RBP6.77□□□□□ -1.33
SMG1-201ENST00000330588 CLDN23Q96B33 292 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 PLD4Q96BZ4 506 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 TCEAL4Q96EI5 215 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 HPDLQ96IR7 371 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 SPATA17Q96L03 361 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 TIGD1Q96MW7 591 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 GCNAQ96QF7 691 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 PLCD4Q9BRC7 762 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 TRMT61BQ9BVS5 477 aaKnown RBP6.77□□□□□ -1.33
SMG1-201ENST00000330588 SMOC2Q9H3U7 446 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 TASP1Q9H6P5 420 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 TBC1D17Q9HA65 648 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 SRA1Q9HD15 236 aaKnown RBP6.77□□□□□ -1.33
SMG1-201ENST00000330588 SLC39A2Q9NP94 309 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 DDX43Q9NXZ2 648 aaKnown RBP6.77□□□□□ -1.33
SMG1-201ENST00000330588 DLGAP2Q9P1A6 1054 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 DENND4CQ5VZ89 1909 aa6.77□□□□□ -1.33
SMG1-201ENST00000330588 PTPRJQ12913 1337 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 A0A1B0GVL5 298 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 ANKRD33BA6NCL7 494 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 CALUO43852 315 aaPredicted RBP6.76□□□□□ -1.33
SMG1-201ENST00000330588 EXOC3O60645 756 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 ZNF202O95125 648 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 KRT19P08727 400 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 MYL4P12829 197 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 ATF6P18850 670 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 TNNI1P19237 187 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 RPL13P26373 211 aaKnown RBP6.76□□□□□ -1.33
SMG1-201ENST00000330588 PPP1R2P41236 205 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms