RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 FDXACB1Q9BRP7 624 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 CADM1Q9BY67 442 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 ELOVL4Q9GZR5 314 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 CSADQ9Y600 493 aa13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 COL11A2P13942 1736 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 MYH9P35579 1960 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-201ENST00000325110 CCDC78A2IDD5 438 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 C19orf81C9J6K1 198 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 TM9SF1O15321 606 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 HOXC6P09630 235 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 TXNP10599 105 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 LCP1P13796 627 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 GOLGA7BQ2TAP0 167 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 DRICH1Q6PGQ1 229 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 C1orf127Q8N9H9 656 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 TMEM174Q8WUU8 243 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 DCAKDQ8WVC6 231 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 BTBD10Q9BSF8 475 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 FAM49AQ9H0Q0 323 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 TMEM134Q9H6X4 195 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 MINDY3Q9H8M7 445 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 EURLQ9NYK6 297 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 WDR35Q9P2L0 1181 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 STYXL1Q9Y6J8 313 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 MAFO75444 373 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 KRT38O76015 456 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 TRUB2O95900 331 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 CLDN10P78369 228 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 CCDC15Q0P6D6 951 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 BST1Q10588 318 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 KCTD2Q14681 263 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 C1orf146Q5VVC0 180 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 PAXIP1Q6ZW49 1069 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 SLC26A11Q86WA9 606 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 POU5F2Q8N7G0 328 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 BANPQ8N9N5 519 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 FAM167AQ96KS9 214 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 PPP1R36Q96LQ0 422 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 B3GNT5Q9BYG0 378 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 SDCBP2Q9H190 292 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 C2orf40Q9H1Z8 148 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 DCLRE1BQ9H816 532 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 CPSF3Q9UKF6 684 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 TTLL3Q9Y4R7 772 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 CXorf49A8MYA2 514 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 PARP6Q2NL67 630 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 FAM183BPQ6ZVS7 135 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 POLNQ7Z5Q5 900 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 RSPH3Q86UC2 560 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 RELL1Q8IUW5 271 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 OXNAD1Q96HP4 312 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 IL1RAPL1Q9NZN1 696 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 SLC17A6Q9P2U8 582 aa13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 MTO1Q9Y2Z2 717 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-201ENST00000325110 QSER1Q2KHR3 1735 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 TXNDC9O14530 226 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 NCF2P19878 526 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 STIP1P31948 543 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 ZNF132P52740 706 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 CDK16Q00536 496 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 TTC39BQ5VTQ0 682 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 CES3Q6UWW8 571 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 METTL7BQ6UX53 244 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 CDHR3Q6ZTQ4 885 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 TEX9Q8N6V9 391 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 MTMR14Q8NCE2 650 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 CLMNQ96JQ2 1002 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 AGAP3Q96P47 875 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 PEBP4Q96S96 227 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 MIPEPQ99797 713 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 CNPY3Q9BT09 278 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 VPS11Q9H270 941 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 PAK5Q9P286 719 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 COL2A1P02458 1487 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 GPR25O00155 361 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 ARIH2O95376 493 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 UBTFL6P0CB48 400 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 ATXN1P54253 815 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 RPL10AP62906 217 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 KLC1Q07866 573 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 TMEM132DQ14C87 1099 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 ATG16L1Q676U5 607 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 TRMT10BQ6PF06 316 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 RINLQ6ZS11 566 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 DENND5BQ6ZUT9 1274 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 SLC4A11Q8NBS3 891 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 MPHOSPH6Q99547 160 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 PPCSQ9HAB8 311 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 ZFATQ9P243 1243 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 LOC100653049A0A140TA62 436 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 SPECC1L-ADORA2AF8WAN1 911 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 KRT34O76011 436 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 SKIP12755 728 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 ALADP13716 330 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 CFAP157Q5JU67 520 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
HMGCS1-201ENST00000325110 LPIN3Q9BQK8 851 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms