RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 WBP2Q969T9 261 aa20.84■□□□□ 0.93
SSNA1-201ENST00000322310 DNAJC19Q96DA6 116 aa20.84■□□□□ 0.93
SSNA1-201ENST00000322310 ZNF518BQ9C0D4 1074 aa20.84■□□□□ 0.93
SSNA1-201ENST00000322310 SLC6A17Q9H1V8 727 aa20.84■□□□□ 0.93
SSNA1-201ENST00000322310 CD248Q9HCU0 757 aa20.84■□□□□ 0.93
SSNA1-201ENST00000322310 MYO18AQ92614 2054 aaKnown RBP20.83■□□□□ 0.93
SSNA1-201ENST00000322310 CLDN5O00501 218 aa20.83■□□□□ 0.93
SSNA1-201ENST00000322310 EIF5BO60841 1220 aaKnown RBP20.83■□□□□ 0.93
SSNA1-201ENST00000322310 GAP43P17677 238 aa20.83■□□□□ 0.93
SSNA1-201ENST00000322310 GJB2P29033 226 aa20.83■□□□□ 0.93
SSNA1-201ENST00000322310 GPD1LQ8N335 351 aa20.83■□□□□ 0.93
SSNA1-201ENST00000322310 BBC3Q96PG8 261 aaPredicted RBP20.83■□□□□ 0.93
SSNA1-201ENST00000322310 DPEP3Q9H4B8 488 aa20.83■□□□□ 0.93
SSNA1-201ENST00000322310 RAXQ9Y2V3 346 aa20.83■□□□□ 0.93
SSNA1-201ENST00000322310 ZNF217O75362 1048 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 TNNC2P02585 160 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 MAOBP27338 520 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 YWHAQP27348 245 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 GNL1P36915 607 aaPredicted RBP20.82■□□□□ 0.92
SSNA1-201ENST00000322310 SF3A1Q15459 793 aaKnown RBP20.82■□□□□ 0.92
SSNA1-201ENST00000322310 SLCO6A1Q86UG4 719 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 CHPFQ8IZ52 775 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 IPO4Q8TEX9 1081 aaKnown RBP20.82■□□□□ 0.92
SSNA1-201ENST00000322310 FBXO32Q969P5 355 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 OTUB2Q96DC9 234 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 SNX25Q9H3E2 840 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 CCSER2Q9H7U1 834 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 SPHK2Q9NRA0 654 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 CHORDC1Q9UHD1 332 aaPredicted RBP20.82■□□□□ 0.92
SSNA1-201ENST00000322310 SH3BP1Q9Y3L3 701 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 PCDHB13Q9Y5F0 798 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 RAD54BQ9Y620 910 aa20.82■□□□□ 0.92
SSNA1-201ENST00000322310 PRPF6O94906 941 aaKnown RBP20.81■□□□□ 0.92
SSNA1-201ENST00000322310 IRF1P10914 325 aa20.81■□□□□ 0.92
SSNA1-201ENST00000322310 PTPN1P18031 435 aaKnown RBP20.81■□□□□ 0.92
SSNA1-201ENST00000322310 GRIK2Q13002 908 aa20.81■□□□□ 0.92
SSNA1-201ENST00000322310 CBWD2Q8IUF1 395 aa20.81■□□□□ 0.92
SSNA1-201ENST00000322310 NUP93Q8N1F7 819 aa20.81■□□□□ 0.92
SSNA1-201ENST00000322310 OR6B3Q8NGW1 331 aa20.81■□□□□ 0.92
SSNA1-201ENST00000322310 ZNF419Q96HQ0 510 aaPredicted RBP20.81■□□□□ 0.92
SSNA1-201ENST00000322310 B3GNT5Q9BYG0 378 aa20.81■□□□□ 0.92
SSNA1-201ENST00000322310 ELOVL4Q9GZR5 314 aa20.81■□□□□ 0.92
SSNA1-201ENST00000322310 OLFML3Q9NRN5 406 aa20.81■□□□□ 0.92
SSNA1-201ENST00000322310 STK17AQ9UEE5 414 aa20.81■□□□□ 0.92
SSNA1-201ENST00000322310 STARD13Q9Y3M8 1113 aa20.81■□□□□ 0.92
SSNA1-201ENST00000322310 SETXQ7Z333 2677 aaKnown RBP20.81■□□□□ 0.92
SSNA1-201ENST00000322310 PLXNB3Q9ULL4 1909 aa20.8■□□□□ 0.92
SSNA1-201ENST00000322310 ZBTB24O43167 697 aaPredicted RBP20.8■□□□□ 0.92
SSNA1-201ENST00000322310 NDUFS2O75306 463 aa20.8■□□□□ 0.92
SSNA1-201ENST00000322310 ZIC2O95409 532 aaPredicted RBP20.8■□□□□ 0.92
SSNA1-201ENST00000322310 BMP15O95972 392 aa20.8■□□□□ 0.92
SSNA1-201ENST00000322310 IDEP14735 1019 aa20.8■□□□□ 0.92
SSNA1-201ENST00000322310 DUOXA2Q1HG44 320 aa20.8■□□□□ 0.92
SSNA1-201ENST00000322310 PREPLQ4J6C6 727 aaPredicted RBP20.8■□□□□ 0.92
SSNA1-201ENST00000322310 HECTD3Q5T447 861 aa20.8■□□□□ 0.92
SSNA1-201ENST00000322310 GRAMD4Q6IC98 578 aa20.8■□□□□ 0.92
SSNA1-201ENST00000322310 NUDT18Q6ZVK8 323 aa20.8■□□□□ 0.92
SSNA1-201ENST00000322310 SCAMP5Q8TAC9 235 aa20.8■□□□□ 0.92
SSNA1-201ENST00000322310 LRIG1Q96JA1 1093 aa20.8■□□□□ 0.92
SSNA1-201ENST00000322310 FAM124BQ9H5Z6 455 aaPredicted RBP20.8■□□□□ 0.92
SSNA1-201ENST00000322310 DNAJC17Q9NVM6 304 aaKnown RBP20.8■□□□□ 0.92
SSNA1-201ENST00000322310 APOBEC2Q9Y235 224 aaKnown RBP20.8■□□□□ 0.92
SSNA1-201ENST00000322310 CBFA2T3O75081 653 aa20.79■□□□□ 0.92
SSNA1-201ENST00000322310 CST3P01034 146 aaPredicted RBP20.79■□□□□ 0.92
SSNA1-201ENST00000322310 SYCP2LQ5T4T6 812 aa20.79■□□□□ 0.92
SSNA1-201ENST00000322310 SDE2Q6IQ49 451 aa20.79■□□□□ 0.92
SSNA1-201ENST00000322310 TOGARAM2Q6ZUX3 1019 aa20.79■□□□□ 0.92
SSNA1-201ENST00000322310 SV2BQ7L1I2 683 aa20.79■□□□□ 0.92
SSNA1-201ENST00000322310 PDZD8Q8NEN9 1154 aa20.79■□□□□ 0.92
SSNA1-201ENST00000322310 MRGPRX1Q96LB2 322 aa20.79■□□□□ 0.92
SSNA1-201ENST00000322310 KCNK16Q96T55 309 aa20.79■□□□□ 0.92
SSNA1-201ENST00000322310 TRIM9Q9C026 710 aa20.79■□□□□ 0.92
SSNA1-201ENST00000322310 SUSD2Q9UGT4 822 aa20.79■□□□□ 0.92
SSNA1-201ENST00000322310 PCOLCE2Q9UKZ9 415 aa20.79■□□□□ 0.92
SSNA1-201ENST00000322310 ZNF233A6NK53 670 aa20.78■□□□□ 0.92
SSNA1-201ENST00000322310 PRRT4C9JH25 899 aa20.78■□□□□ 0.92
SSNA1-201ENST00000322310 TACC1O75410 805 aa20.78■□□□□ 0.92
SSNA1-201ENST00000322310 RTN3O95197 1032 aaPredicted RBP20.78■□□□□ 0.92
SSNA1-201ENST00000322310 GNSP15586 552 aa20.78■□□□□ 0.92
SSNA1-201ENST00000322310 KIAA1324Q6UXG2 1013 aaKnown RBP20.78■□□□□ 0.92
SSNA1-201ENST00000322310 TRAPPC11Q7Z392 1133 aa20.78■□□□□ 0.92
SSNA1-201ENST00000322310 B3GALNT2Q8NCR0 500 aa20.78■□□□□ 0.92
SSNA1-201ENST00000322310 OVCA2Q8WZ82 227 aa20.78■□□□□ 0.92
SSNA1-201ENST00000322310 GABRG3Q99928 467 aa20.78■□□□□ 0.92
SSNA1-201ENST00000322310 IL21RQ9HBE5 538 aa20.78■□□□□ 0.92
SSNA1-201ENST00000322310 CACNA2D2Q9NY47 1150 aa20.78■□□□□ 0.92
SSNA1-201ENST00000322310 CCDC39Q9UFE4 941 aa20.78■□□□□ 0.92
SSNA1-201ENST00000322310 APC2O95996 2303 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 WASH3PC4AMC7 463 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 NEDD8-MDP1E9PL57 170 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 PGFP49763 221 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 ALCAMQ13740 583 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 WDR45BQ5MNZ6 344 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 RRAGBQ5VZM2 374 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 GLRX5Q86SX6 157 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 MARCH9Q86YJ5 346 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 WDR49Q8IV35 697 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 GLIS3Q8NEA6 775 aa20.77■□□□□ 0.92
SSNA1-201ENST00000322310 SETD7Q8WTS6 366 aaKnown RBP20.77■□□□□ 0.92
SSNA1-201ENST00000322310 FOXJ1Q92949 421 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms