RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 KIAA0319LQ8IZA0 1049 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 TMEM130Q8N3G9 435 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 OR6P1Q8NGX9 317 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 EXD1Q8NHP7 514 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 TMA16Q96EY4 203 aaKnown RBP15.81■□□□□ 0.12
VARS2-201ENST00000321897 GCNAQ96QF7 691 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 GCOM2Q9BZD3 368 aaPredicted RBP15.81■□□□□ 0.12
VARS2-201ENST00000321897 WHRNQ9P202 907 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 WARS2Q9UGM6 360 aaKnown RBP15.81■□□□□ 0.12
VARS2-201ENST00000321897 ARHGAP26Q9UNA1 814 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 RGL2O15211 777 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 MT-CO1P00395 513 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 GEMIN4P57678 1058 aaKnown RBP15.81■□□□□ 0.12
VARS2-201ENST00000321897 TNFAIP2Q03169 654 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 ZACNQ401N2 412 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 ANKRD20A4Q4UJ75 823 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 JADE1Q6IE81 842 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 CLEC4DQ8WXI8 215 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 CLPTM1LQ96KA5 538 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 SIKE1Q9BRV8 207 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 SPC25Q9HBM1 224 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 SSX2IPQ9Y2D8 614 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 ADGRA3Q8IWK6 1321 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 ZNF142P52746 1687 aaPredicted RBP15.81■□□□□ 0.12
VARS2-201ENST00000321897 SPDYE16A6NNV3 312 aaPredicted RBP15.81■□□□□ 0.12
VARS2-201ENST00000321897 KBTBD13C9JR72 458 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 XPOTO43592 962 aaKnown RBP15.81■□□□□ 0.12
VARS2-201ENST00000321897 ACO1P21399 889 aaKnown RBP15.81■□□□□ 0.12
VARS2-201ENST00000321897 GLRBP48167 497 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 CENPCQ03188 943 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 FSTL1Q12841 308 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 USP6NLQ92738 828 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 E2F7Q96AV8 911 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 TLCD1Q96CP7 247 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 ACSS2Q9NR19 701 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 GTSE1Q9NYZ3 720 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 PEX1O43933 1283 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 IL1RL1Q01638 556 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 RFWD3Q6PCD5 774 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 FAM81AQ8TBF8 368 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 LRRC4CQ9HCJ2 640 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 DTNAQ9Y4J8 743 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 PSTPIP1O43586 416 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 CLPTM1O96005 669 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 ABCD1P33897 745 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 ADCYAP1R1P41586 468 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 PRAMEF19Q5SWL8 479 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 RARS2Q5T160 578 aaKnown RBP15.8■□□□□ 0.12
VARS2-201ENST00000321897 UBAP2Q5T6F2 1119 aaKnown RBP15.8■□□□□ 0.12
VARS2-201ENST00000321897 MAP1SQ66K74 1059 aaPredicted RBP15.8■□□□□ 0.12
VARS2-201ENST00000321897 ZNF677Q86XU0 584 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 CCT7Q99832 543 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 DCUN1D5Q9BTE7 237 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 XPNPEP1Q9NQW7 623 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 GALNT8Q9NY28 637 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 RNF103-CHMP3A0A140T963 221 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 HBP1O60381 514 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 HNRNPCL1O60812 293 aaKnown RBP15.8■□□□□ 0.12
VARS2-201ENST00000321897 ANO4Q32M45 955 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 DNAL1Q4LDG9 190 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 C16orf46Q6P387 395 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 EME1Q96AY2 570 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 L3MBTL3Q96JM7 780 aaPredicted RBP15.8■□□□□ 0.12
VARS2-201ENST00000321897 FAM193BQ96PV7 902 aaPredicted RBP15.8■□□□□ 0.12
VARS2-201ENST00000321897 SERPINI1Q99574 410 aa15.8■□□□□ 0.12
VARS2-201ENST00000321897 FAM237BA0A1B0GVD1 139 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 TPST1O60507 370 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 VCPP55072 806 aaKnown RBP15.79■□□□□ 0.12
VARS2-201ENST00000321897 NOMO3P69849 1222 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 TAF5Q15542 800 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 TXNRD3NBQ6F5E7 133 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 PIGWQ7Z7B1 504 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 ZNF669Q96BR6 464 aaPredicted RBP15.79■□□□□ 0.12
VARS2-201ENST00000321897 ZNF317Q96PQ6 595 aaPredicted RBP15.79■□□□□ 0.12
VARS2-201ENST00000321897 B3GNT5Q9BYG0 378 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 GRIP2Q9C0E4 1043 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 EBF2Q9HAK2 575 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 IL1RAPL1Q9NZN1 696 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 SLC12A4Q9UP95 1085 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 PARP4Q9UKK3 1724 aaKnown RBP15.79■□□□□ 0.12
VARS2-201ENST00000321897 CD48P09326 243 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 TPH1P17752 444 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 TAC1P20366 129 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 PPP1R2P3Q6NXS1 205 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 METTL7BQ6UX53 244 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 CHST13Q8NET6 341 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 RNF139Q8WU17 664 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 EDEM1Q92611 657 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 ASCC2Q9H1I8 757 aaPredicted RBP15.79■□□□□ 0.12
VARS2-201ENST00000321897 PORCNQ9H237 461 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 WASF2Q9Y6W5 498 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 C5orf60A6NFR6 353 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 M0QYT0 321 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 PLSCR1O15162 318 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 MCF2P10911 925 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 RBL1P28749 1068 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 PTGER2P43116 358 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 MAB21L3Q8N8X9 362 aa15.79■□□□□ 0.12
VARS2-201ENST00000321897 EIF1ADQ8N9N8 165 aaKnown RBP15.79■□□□□ 0.12
VARS2-201ENST00000321897 BHMTQ93088 406 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms