RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 CDH6P55285 790 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 MRPS35P82673 323 aaKnown RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 OCRLQ01968 901 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 CDK18Q07002 472 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 GRIK3Q13003 919 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 ORC1Q13415 861 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 TSNAXIP1Q2TAA8 658 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 HSF5Q4G112 596 aaPredicted RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 ACSBG2Q5FVE4 666 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 NOL9Q5SY16 702 aaKnown RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 FAM102AQ5T9C2 384 aaPredicted RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 SH3PXD2AQ5TCZ1 1133 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 LBX2Q6XYB7 198 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 RINLQ6ZS11 566 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 TTC7BQ86TV6 843 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 ZC3H18Q86VM9 953 aaKnown RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 CAND1Q86VP6 1230 aaKnown RBP9.06□□□□□ -0.96
CLK1-201ENST00000321356 TMEM192Q8IY95 271 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 PLD5Q8N7P1 536 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 DNAJC9Q8WXX5 260 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 TTC17Q96AE7 1141 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 FAF2Q96CS3 445 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 ADPGKQ9BRR6 497 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 RAB6BQ9NRW1 208 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 NMRK1Q9NWW6 199 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 KCNK4Q9NYG8 393 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 SIRPGQ9P1W8 387 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 TNFSF13BQ9Y275 285 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 PLLPQ9Y342 182 aa9.06□□□□□ -0.96
CLK1-201ENST00000321356 BCLAF3A2AJT9 711 aaKnown RBP9.05□□□□□ -0.96
CLK1-201ENST00000321356 CXorf49A8MYA2 514 aaPredicted RBP9.05□□□□□ -0.96
CLK1-201ENST00000321356 NFKBIEO00221 500 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 DPYSL4O14531 572 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 NVLO15381 856 aaKnown RBP9.05□□□□□ -0.96
CLK1-201ENST00000321356 KRT37O76014 449 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 NEBLO76041 1014 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 KRT19P08727 400 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 GSTA2P09210 222 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 LINGO3P0C6S8 592 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 CYP3A5P20815 502 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 TGM2P21980 687 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 ATICP31939 592 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 RAP1GDS1P52306 607 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 OSTNP61366 133 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 MRPS5P82675 430 aaKnown RBP9.05□□□□□ -0.96
CLK1-201ENST00000321356 ZBTB16Q05516 673 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 MBTD1Q05BQ5 628 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 INCA1Q0VD86 236 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 PDK2Q15119 407 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 TEX44Q53QW1 395 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 RAB6CQ53S08 254 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 SLC9A4Q6AI14 798 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 TRIM68Q6AZZ1 485 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 PLPPR4Q7Z2D5 763 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 APBB1IPQ7Z5R6 666 aaPredicted RBP9.05□□□□□ -0.96
CLK1-201ENST00000321356 TRIM50Q86XT4 487 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 RIOX2Q8IUF8 465 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 TRIM42Q8IWZ5 723 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 LMNTD2Q8IXW0 634 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 PQLC3Q8N755 202 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 MCUQ8NE86 351 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 TEKT4Q8WW24 435 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 NRG4Q8WWG1 115 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 RXFP2Q8WXD0 754 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 FAM136AQ96C01 138 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 LRRC39Q96DD0 335 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 CFAP36Q96G28 342 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 GPR20Q99678 358 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 NMUR2Q9GZQ4 415 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 RAB6CQ9H0N0 254 aa9.05□□□□□ -0.96
CLK1-201ENST00000321356 FAM124BQ9H5Z6 455 aaPredicted RBP9.05□□□□□ -0.96
CLK1-201ENST00000321356 RPF1Q9H9Y2 349 aaKnown RBP9.05□□□□□ -0.96
CLK1-201ENST00000321356 ZC3H7BQ9UGR2 993 aaKnown RBP9.05□□□□□ -0.96
CLK1-201ENST00000321356 C2orf71A6NGG8 1288 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 SLC15A5A6NIM6 579 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 ZNF487B1APH4 448 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 H7C0C1 242 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 GPR25O00155 361 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 KCNN4O15554 427 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 PRPSAP2O60256 369 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 KRT36O76013 467 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 PSMG1O95456 288 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 ITGB3P05106 788 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 ESRRAP11474 423 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 PDGFRAP16234 1089 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 ATP5OP48047 213 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 BST1Q10588 318 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 LBRQ14739 615 aaKnown RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 KPNB1Q14974 876 aaKnown RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 RCN1Q15293 331 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 LY6KQ17RY6 165 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 PRAMEF18Q5VWM3 479 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 CES4AQ5XG92 561 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 CCDC62Q6P9F0 684 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 APLFQ8IW19 511 aaPredicted RBP9.04□□□□□ -0.96
CLK1-201ENST00000321356 VPS52Q8N1B4 723 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 TMEM130Q8N3G9 435 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 PPM1NQ8N819 430 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 RAB3IL1Q8TBN0 382 aa9.04□□□□□ -0.96
CLK1-201ENST00000321356 WDR60Q8WVS4 1066 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms