RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 A0A0B4J269 797 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 C2orf71A6NGG8 1288 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 SIGLEC16A6NMB1 481 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 POLBP06746 335 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 HSPA8P11142 646 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 GRK2P25098 689 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 ADORA2BP29275 332 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 MTHFD1LQ6UB35 978 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 CCDC60Q8IWA6 550 aaPredicted RBP13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 DCLK2Q8N568 766 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 CCDC33Q8N5R6 958 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 BSNDQ8WZ55 320 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 CPT1BQ92523 772 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 NMD3Q96D46 503 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 FAM49BQ9NUQ9 324 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 NENFQ9UMX5 172 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 ECM29Q5VYK3 1845 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 MYH11P35749 1972 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 RALBP11234 206 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 CNTFP26441 200 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 GSTT1P30711 240 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 N4BP2L1Q5TBK1 243 aaPredicted RBP13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 STYK1Q6J9G0 422 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 DENND1BQ6P3S1 775 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 MCUQ8NE86 351 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 EME1Q96AY2 570 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 KIF12Q96FN5 646 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 PHACTR1Q9C0D0 580 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 SSU72Q9NP77 194 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 MRPL40Q9NQ50 206 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 XPOTO43592 962 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 KCNA4P22459 653 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 HSD17B4P51659 736 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 RBP5P82980 135 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 BTKQ06187 659 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 PDPK2PQ6A1A2 396 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 TLDC1Q6P9B6 456 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 TMA16Q96EY4 203 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 MECRQ9BV79 373 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 RABGEF1Q9UJ41 708 aa13.2□□□□□ -0.3
DNMT3A-202ENST00000321117 ADAMTSL3P82987 1691 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 TRDMT1O14717 391 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 DGKIO75912 1065 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 NPTXRO95502 500 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 LCP1P13796 627 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 CDKN2BP42772 138 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 SLC1A6P48664 564 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 TMEM132DQ14C87 1099 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 ANKRD22Q5VYY1 191 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 ULK2Q8IYT8 1036 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 SH3TC2Q8TF17 1288 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 GDPD5Q8WTR4 605 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 FAM172AQ8WUF8 416 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 HDAC11Q96DB2 347 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 HPDLQ96IR7 371 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 ASCC2Q9H1I8 757 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 CCNE2O96020 404 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 PROCP04070 461 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 ATP5BP06576 529 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 VDRP11473 427 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 SLC18A1P54219 525 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 TBL3Q12788 808 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 SIX1Q15475 284 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 OLFML2BQ68BL8 750 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 ANO7Q6IWH7 933 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 DRICH1Q6PGQ1 229 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 NPNTQ6UXI9 565 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 ZNF669Q96BR6 464 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 NR1H4Q96RI1 486 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 TAS2R1Q9NYW7 299 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 SDR42E2A6NKP2 422 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 E9PBE3 544 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 KLHL41O60662 606 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 RBL1P28749 1068 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 CDH8P55286 799 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 SLC25A3Q00325 362 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 ACSBG2Q5FVE4 666 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 TCHHL1Q5QJ38 904 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 FNBP1LQ5T0N5 605 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 DENND5BQ6ZUT9 1274 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 SYT11Q9BT88 431 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 PRKAG3Q9UGI9 489 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 RPS6KL1Q9Y6S9 549 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 UBR2Q8IWV8 1755 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 CHADO15335 359 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 CLPTM1O96005 669 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 SERPINE1P05121 402 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 TCN1P20061 433 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 MRPS9P82933 396 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 KRT72Q14CN4 511 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 GLIS1Q8NBF1 620 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 ZNF280CQ8ND82 737 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 B4GALNT2Q8NHY0 566 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 PIWIL2Q8TC59 973 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 ECSITQ9BQ95 431 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 DRC3Q9H069 523 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 ZMYND8Q9ULU4 1186 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 STAP1Q9ULZ2 295 aa13.19□□□□□ -0.3
DNMT3A-202ENST00000321117 POLIQ9UNA4 740 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms