RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SNHG28P0DPA3 235 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 TFE3P19532 575 aaPredicted RBP17.07■□□□□ 0.32
CLIP4-201ENST00000320081 SNRPFP62306 86 aaKnown RBP17.07■□□□□ 0.32
CLIP4-201ENST00000320081 JAG1P78504 1218 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 BEX3Q00994 111 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 BIRC2Q13490 618 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 CAPSQ13938 189 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 RASA2Q15283 850 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 ERO1BQ86YB8 467 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.07■□□□□ 0.32
CLIP4-201ENST00000320081 MAGEB18Q96M61 343 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 PDGFCQ9NRA1 345 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 O00370 1275 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 PDE5AO76074 875 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 SUPT7LO94864 414 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 LMNAP02545 664 aaKnown RBP17.06■□□□□ 0.32
CLIP4-201ENST00000320081 CCND1P24385 295 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 NRLP54845 237 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 LBRQ14739 615 aaKnown RBP17.06■□□□□ 0.32
CLIP4-201ENST00000320081 ZCWPW2Q504Y3 356 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 C9orf131Q5VYM1 1079 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 BRSK2Q8IWQ3 736 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 COLGALT1Q8NBJ5 622 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 REPS2Q8NFH8 660 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 SPDYE1Q8NFV5 336 aaPredicted RBP17.06■□□□□ 0.32
CLIP4-201ENST00000320081 ASIC4Q96FT7 647 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 ING2Q9H160 280 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 LATS2Q9NRM7 1088 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 IL1RAPL1Q9NZN1 696 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 A0A1W2PPM1 405 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 BUD23O43709 281 aaKnown RBP17.06■□□□□ 0.32
CLIP4-201ENST00000320081 DUPD1Q68J44 220 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 STRA8Q7Z7C7 330 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 JOSD2Q8TAC2 188 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 EME1Q96AY2 570 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 B3GNT5Q9BYG0 378 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 ARHGAP26Q9UNA1 814 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 WDR27A2RRH5 827 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 ZC3H11AO75152 810 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLIP4-201ENST00000320081 ZC3H12AQ5D1E8 599 aaKnown RBP17.06■□□□□ 0.32
CLIP4-201ENST00000320081 KCTD17Q8N5Z5 321 aa17.06■□□□□ 0.32
CLIP4-201ENST00000320081 USP13Q92995 863 aaPredicted RBP17.06■□□□□ 0.32
CLIP4-201ENST00000320081 PTPN7P35236 360 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 TKTL1P51854 596 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 BTNL9Q6UXG8 535 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 CHSY1Q86X52 802 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 TRPM4Q8TD43 1214 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 PHF21BQ96EK2 531 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 MYH2Q9UKX2 1941 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 ZMPSTE24O75844 475 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 SETSIPP0DME0 302 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 RPS12P25398 132 aaKnown RBP17.05■□□□□ 0.32
CLIP4-201ENST00000320081 MGAT1P26572 445 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 GTF2A2P52657 109 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 FASTKD3Q14CZ7 662 aaKnown RBP17.05■□□□□ 0.32
CLIP4-201ENST00000320081 SLFN11Q7Z7L1 901 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 SLC26A11Q86WA9 606 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 ADGRF2Q8IZF7 708 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 XPO1O14980 1071 aaKnown RBP17.05■□□□□ 0.32
CLIP4-201ENST00000320081 AKAP10O43572 662 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 ZNF862O60290 1169 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 HSPA8P11142 646 aaKnown RBP17.05■□□□□ 0.32
CLIP4-201ENST00000320081 IMPG1Q17R60 797 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 EFHC1Q5JVL4 640 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 FBXO47Q5MNV8 452 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 TTC27Q6P3X3 843 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 TTC39CQ8N584 583 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 RPRD1AQ96P16 312 aaPredicted RBP17.05■□□□□ 0.32
CLIP4-201ENST00000320081 PCDH9Q9HC56 1237 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 UBQLN1Q9UMX0 589 aaKnown RBP17.05■□□□□ 0.32
CLIP4-201ENST00000320081 MTO1Q9Y2Z2 717 aaKnown RBP17.05■□□□□ 0.32
CLIP4-201ENST00000320081 UBIAD1Q9Y5Z9 338 aa17.05■□□□□ 0.32
CLIP4-201ENST00000320081 C2orf71A6NGG8 1288 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 CNGA2Q16280 664 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 TCHHL1Q5QJ38 904 aaPredicted RBP17.04■□□□□ 0.32
CLIP4-201ENST00000320081 C10orf120Q5SQS8 335 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 TATDN1Q6P1N9 297 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 DEFB106AQ8N104 65 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 SRPK1Q96SB4 655 aaKnown RBP17.04■□□□□ 0.32
CLIP4-201ENST00000320081 MYLK2Q9H1R3 596 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 EGFRP00533 1210 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 CD4P01730 458 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 SKOR1P84550 965 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 MED21Q13503 144 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 ZACNQ401N2 412 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 ZBED2Q9BTP6 218 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 PORCNQ9H237 461 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 MYBPC2Q14324 1141 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 STILQ15468 1287 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 NDRG1Q92597 394 aaKnown RBP17.04■□□□□ 0.32
CLIP4-201ENST00000320081 HPS4Q9NQG7 708 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 EME2A4GXA9 379 aaPredicted RBP17.04■□□□□ 0.32
CLIP4-201ENST00000320081 ATP6V1G2O95670 118 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 MUTP22033 750 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 ZNF75CPQ92670 426 aaPredicted RBP17.04■□□□□ 0.32
CLIP4-201ENST00000320081 WNK4Q96J92 1243 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 MECRQ9BV79 373 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 FOXP3Q9BZS1 431 aa17.04■□□□□ 0.32
CLIP4-201ENST00000320081 RASSF10A6NK89 507 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 ACKR2O00590 384 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms