RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 PSMG2Q969U7 264 aa14.27□□□□□ -0.13
PRPF18-201ENST00000320054 TTYH1Q9H313 450 aaPredicted RBP14.27□□□□□ -0.13
PRPF18-201ENST00000320054 MAN1C1Q9NR34 630 aa14.27□□□□□ -0.13
PRPF18-201ENST00000320054 CHORDC1Q9UHD1 332 aaPredicted RBP14.27□□□□□ -0.13
PRPF18-201ENST00000320054 PAXBP1Q9Y5B6 917 aa14.27□□□□□ -0.13
PRPF18-201ENST00000320054 HCFC2Q9Y5Z7 792 aa14.27□□□□□ -0.13
PRPF18-201ENST00000320054 DOCK6Q96HP0 2047 aa14.27□□□□□ -0.13
PRPF18-201ENST00000320054 NOTCH4Q99466 2003 aa14.27□□□□□ -0.13
PRPF18-201ENST00000320054 C2orf16Q68DN1 1984 aa14.27□□□□□ -0.13
PRPF18-201ENST00000320054 YJEFN3A6XGL0 299 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 E7ENQ6 273 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 DPYSL4O14531 572 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 PER2O15055 1255 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 BUB1O43683 1085 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 DAB1O75553 588 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 LTFP02788 710 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 EPCAMP16422 314 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 RFC1P35251 1148 aaPredicted RBP14.26□□□□□ -0.13
PRPF18-201ENST00000320054 NRIP1P48552 1158 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 PSEN1P49768 467 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 RPL7AP62424 266 aaKnown RBP14.26□□□□□ -0.13
PRPF18-201ENST00000320054 MTMR3Q13615 1198 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 TAF5Q15542 800 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 PPM1LQ5SGD2 360 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 C11orf63Q6NUN7 778 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 DNAJB7Q7Z6W7 309 aaPredicted RBP14.26□□□□□ -0.13
PRPF18-201ENST00000320054 RBM23Q86U06 439 aaKnown RBP14.26□□□□□ -0.13
PRPF18-201ENST00000320054 PDZD8Q8NEN9 1154 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 TPCN2Q8NHX9 752 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 JOSD2Q8TAC2 188 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 UBE2Q2Q8WVN8 375 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 NDRG1Q92597 394 aaKnown RBP14.26□□□□□ -0.13
PRPF18-201ENST00000320054 GOLGA1Q92805 767 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 MCEEQ96PE7 176 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 SLITRK1Q96PX8 696 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 SLC2A13Q96QE2 648 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 PRDM12Q9H4Q4 367 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 POPDC2Q9HBU9 364 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 ZDHHC7Q9NXF8 308 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 UXTQ9UBK9 157 aaPredicted RBP14.26□□□□□ -0.13
PRPF18-201ENST00000320054 IP6K2Q9UHH9 426 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 ANAPC7Q9UJX3 599 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 PRRC2BQ5JSZ5 2229 aaKnown RBP14.26□□□□□ -0.13
PRPF18-201ENST00000320054 LAMA3Q16787 3333 aa14.26□□□□□ -0.13
PRPF18-201ENST00000320054 C2CD4BA6NLJ0 364 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 ESPNB1AK53 854 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 MYO1FO00160 1098 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 KIF5CO60282 957 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 MOCS3O95396 460 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 GJB6O95452 261 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 FYNP06241 537 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 ZDHHC11BP0C7U3 371 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 GPD1P21695 349 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 MAN1A1P33908 653 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 MATKP42679 507 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 PPP3CCP48454 512 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 NAP1L1P55209 391 aaKnown RBP14.25□□□□□ -0.13
PRPF18-201ENST00000320054 YWHAGP61981 247 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRPF18-201ENST00000320054 IFRD2Q12894 506 aaPredicted RBP14.25□□□□□ -0.13
PRPF18-201ENST00000320054 TAF10Q12962 218 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 ACAP1Q15027 740 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 TAF12Q16514 161 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 SNX30Q5VWJ9 437 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 TMEM184AQ6ZMB5 413 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 SLFN11Q7Z7L1 901 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 SCD5Q86SK9 330 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 ELMOD1Q8N336 334 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 ZNF276Q8N554 614 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 NIPA2Q8N8Q9 360 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 STKLD1Q8NE28 680 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 TRIM58Q8NG06 486 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 CASP10Q92851 521 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 FBXO32Q969P5 355 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 FAM149B1Q96BN6 582 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 ZNF512Q96ME7 567 aaPredicted RBP14.25□□□□□ -0.13
PRPF18-201ENST00000320054 DDX23Q9BUQ8 820 aaKnown RBP14.25□□□□□ -0.13
PRPF18-201ENST00000320054 TLR8Q9NR97 1041 aaKnown RBP14.25□□□□□ -0.13
PRPF18-201ENST00000320054 ABCC13Q9NSE7 274 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 DZANK1Q9NVP4 752 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 RRN3Q9NYV6 651 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRPF18-201ENST00000320054 CLIC5Q9NZA1 410 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 CAPN6Q9Y6Q1 641 aa14.25□□□□□ -0.13
PRPF18-201ENST00000320054 HELZP42694 1942 aaKnown RBP14.25□□□□□ -0.13
PRPF18-201ENST00000320054 GRID2IPA4D2P6 1211 aa14.24□□□□□ -0.13
PRPF18-201ENST00000320054 SOX1O00570 391 aaPredicted RBP14.24□□□□□ -0.13
PRPF18-201ENST00000320054 ZNF500O60304 480 aaPredicted RBP14.24□□□□□ -0.13
PRPF18-201ENST00000320054 BUB1BO60566 1050 aaPredicted RBP14.24□□□□□ -0.13
PRPF18-201ENST00000320054 GRAP2O75791 330 aa14.24□□□□□ -0.13
PRPF18-201ENST00000320054 PROSCO94903 275 aa14.24□□□□□ -0.13
PRPF18-201ENST00000320054 TUBB4AP04350 444 aa14.24□□□□□ -0.13
PRPF18-201ENST00000320054 PDGFRAP16234 1089 aa14.24□□□□□ -0.13
PRPF18-201ENST00000320054 NOS2P35228 1153 aa14.24□□□□□ -0.13
PRPF18-201ENST00000320054 FLT3P36888 993 aa14.24□□□□□ -0.13
PRPF18-201ENST00000320054 PTPN9P43378 593 aa14.24□□□□□ -0.13
PRPF18-201ENST00000320054 ZNF143P52747 638 aaPredicted RBP14.24□□□□□ -0.13
PRPF18-201ENST00000320054 RNASE9P60153 205 aaKnown RBP14.24□□□□□ -0.13
PRPF18-201ENST00000320054 OGDHQ02218 1023 aa14.24□□□□□ -0.13
PRPF18-201ENST00000320054 PIGHQ14442 188 aaPredicted RBP14.24□□□□□ -0.13
PRPF18-201ENST00000320054 GRIN2CQ14957 1233 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms