RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 C7orf31Q8N865 590 aa16.22■□□□□ 0.19
SHROOM1-201ENST00000319854 SLC4A11Q8NBS3 891 aa16.22■□□□□ 0.19
SHROOM1-201ENST00000319854 KIF12Q96FN5 646 aa16.22■□□□□ 0.19
SHROOM1-201ENST00000319854 PDZD7Q9H5P4 517 aa16.22■□□□□ 0.19
SHROOM1-201ENST00000319854 NPHS2Q9NP85 383 aa16.22■□□□□ 0.19
SHROOM1-201ENST00000319854 GPATCH2LQ9NWQ4 482 aa16.22■□□□□ 0.19
SHROOM1-201ENST00000319854 DCTN4Q9UJW0 460 aa16.22■□□□□ 0.19
SHROOM1-201ENST00000319854 PTPRFP10586 1907 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 hCG_1818297A0A087WSY0 165 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 PPEF2O14830 753 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 ZCCHC18P0CG32 403 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 MAN1A1P33908 653 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 NPNTQ6UXI9 565 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 FASTKD5Q7L8L6 764 aaKnown RBP16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 TRABD2AQ86V40 505 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 FBXO41Q8TF61 875 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 ARL8BQ9NVJ2 186 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 EXOC1LA0A1B0GW35 172 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 H3BRB1 525 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 PDHXO00330 501 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 PYGBP11216 843 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 GSTT1P30711 240 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 CDKN2BP42772 138 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 NEK3P51956 506 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 NDST1P52848 882 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 YWHAEP62258 255 aaKnown RBP16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 LRRC74BQ6ZQY2 392 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 CLNKQ7Z7G1 428 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 TUT1Q9H6E5 874 aaKnown RBP16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 CYLDQ9NQC7 956 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 WASF2Q9Y6W5 498 aa16.21■□□□□ 0.19
SHROOM1-201ENST00000319854 B4GALT4O60513 344 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 PROZP22891 400 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 EIF4BP23588 611 aaKnown RBP16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 OCRLQ01968 901 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 OVGP1Q12889 678 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 PIGHQ14442 188 aaPredicted RBP16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 TMEM132DQ14C87 1099 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 FAM71DQ8N9W8 422 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 GPRC5AQ8NFJ5 357 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 SH3TC2Q8TF17 1288 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 TRAPPC9Q96Q05 1148 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 ADPGKQ9BRR6 497 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 MIS12Q9H081 205 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 C12orf65Q9H3J6 166 aaKnown RBP16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 KRT82Q9NSB4 513 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 TNFSF13BQ9Y275 285 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 SNX9Q9Y5X1 595 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 LSM8O95777 96 aaKnown RBP16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 KLRC2P26717 231 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 RASSF2P50749 326 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 PDIA2Q13087 525 aaKnown RBP16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 SNAPC2Q13487 334 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 SURF1Q15526 300 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 RFWD2Q8NHY2 731 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 SLCO2A1Q92959 643 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 MROH8Q9H579 483 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 PRMT7Q9NVM4 692 aaPredicted RBP16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 KAT6AQ92794 2004 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 A0A1W2PPM1 405 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 GSC2O15499 205 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 SKIP12755 728 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 MIPP30301 263 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 ENPEPQ07075 957 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 PDK4Q16654 411 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 ILDR2Q71H61 639 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 ACOT1Q86TX2 421 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 TMEM176AQ96HP8 235 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 SPON1Q9HCB6 807 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 NGRNQ9NPE2 291 aaKnown RBP16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 KLK14Q9P0G3 267 aa16.2■□□□□ 0.18
SHROOM1-201ENST00000319854 WDR91A4D1P6 747 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 E5RJQ4 531 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 F5H423 210 aaPredicted RBP16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 KRT15P19012 456 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 BASP1P80723 227 aaKnown RBP16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 ANKRD22Q5VYY1 191 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 TAPT1Q6NXT6 567 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 C1orf228Q6PIY5 440 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 FAM81AQ8TBF8 368 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 RSAD2Q8WXG1 361 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 TRABDQ9H4I3 376 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 KCNH4Q9UQ05 1017 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 ACTL7BQ9Y614 415 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 WDR90Q96KV7 1748 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 TCRBV5S1A1TA0A578 114 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 CFAP69A5D8W1 941 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 ASB14A6NK59 587 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 PSMG1O95456 288 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 SLC34A1Q06495 639 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 SPARCL1Q14515 664 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 XYLT1Q86Y38 959 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 CDHR5Q9HBB8 845 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 DPP3Q9NY33 737 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 SNTG2Q9NY99 539 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 LNPEPQ9UIQ6 1025 aa16.19■□□□□ 0.18
SHROOM1-201ENST00000319854 GAS2O43903 313 aaKnown RBP16.18■□□□□ 0.18
SHROOM1-201ENST00000319854 LMNAP02545 664 aaKnown RBP16.18■□□□□ 0.18
SHROOM1-201ENST00000319854 PDGFRBP09619 1106 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms