RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 KIAA2013Q8IYS2 634 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 GABPB2Q8TAK5 448 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 KCNK16Q96T55 309 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 HAUS8Q9BT25 410 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 PHACTR1Q9C0D0 580 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 TSR3Q9UJK0 312 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 KIAA0100Q14667 2235 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 C15orf38-AP3S2A0A0A6YYH1 394 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 ARHGEF37A1IGU5 675 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 MAP3K13O43283 966 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 S100BP04271 92 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 VIL1P09327 827 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 EIF2B2P49770 351 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 CSE1LP55060 971 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 HDAC4P56524 1084 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 CDC16Q13042 620 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 PDK1Q15118 436 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 CARTPTQ16568 116 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 KLC3Q6P597 504 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 NPNTQ6UXI9 565 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 SPOCD1Q6ZMY3 1216 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 ARPINQ7Z6K5 226 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 UBA3Q8TBC4 463 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 SLC10A4Q96EP9 437 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 ANKRD27Q96NW4 1050 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 CDRT15Q96T59 188 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 APOL2Q9BQE5 337 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 EFHD1Q9BUP0 239 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 FAM192AQ9GZU8 254 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 UPF3AQ9H1J1 476 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 RNPEPQ9H4A4 650 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 PIF1Q9H611 641 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 PTPRHQ9HD43 1115 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 SAR1AQ9NR31 198 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 KRT82Q9NSB4 513 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 FAM49BQ9NUQ9 324 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 AGO2Q9UKV8 859 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 C10orf71Q711Q0 1435 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 MROH7Q68CQ1 1323 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 GLTPD2A6NH11 291 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 SPDYE16A6NNV3 312 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 LIN7AO14910 233 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 SLITRK3O94933 977 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 FOLH1Q04609 750 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 DCTN2Q13561 401 aaKnown RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 LBRQ14739 615 aaKnown RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 NEDD8Q15843 81 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 FASTKD1Q53R41 847 aaKnown RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 PDPK2PQ6A1A2 396 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 AMIGO2Q86SJ2 522 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 DHDDSQ86SQ9 333 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 ZCCHC9Q8N567 271 aaKnown RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 ADAM32Q8TC27 787 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 NAT14Q8WUY8 206 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 UTP4Q969X6 686 aaKnown RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 CMTM5Q96DZ9 223 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 TMEM79Q9BSE2 394 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 POLR3CQ9BUI4 534 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 KLHL25Q9H0H3 589 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 SIX2Q9NPC8 291 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 IL1RAPL1Q9NZN1 696 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 STXBP5LQ9Y2K9 1186 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 ZMYM2Q9UBW7 1377 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 NCANO14594 1321 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 C1orf232A0A0U1RR37 186 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 GOLGA8TH3BQL2 631 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 PEX10O60683 326 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 PPP1R11O60927 126 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 ASMTLO95671 621 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 F7P08709 466 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 GZMAP12544 262 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 RFX1P22670 979 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 AVPR1AP37288 418 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 SKIV2L2P42285 1042 aaKnown RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 CHN2P52757 468 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 HMGCS2P54868 508 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 MORF4L2Q15014 288 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 CLEC16AQ2KHT3 1053 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 ZNF699Q32M78 642 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 WDR72Q3MJ13 1102 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 B3GNT6Q6ZMB0 384 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 ACAD11Q709F0 780 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 NCAPG2Q86XI2 1143 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 GPD1LQ8N335 351 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 AGBL3Q8NEM8 1001 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 SLC7A3Q8WY07 619 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 TARS2Q9BW92 718 aaKnown RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 LRRC19Q9H756 370 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 ADARB2Q9NS39 739 aaKnown RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 STX18Q9P2W9 335 aaKnown RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 PRR12Q9ULL5 1215 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 AFG3L2Q9Y4W6 797 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 TNRC6CQ9HCJ0 1690 aaKnown RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 MAGEB3O15480 346 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 ADRB2P07550 413 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 C6orf52Q5T4I8 152 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 TTC39BQ5VTQ0 682 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 ANKRD22Q5VYY1 191 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 TTC33Q6PID6 262 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms