RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 VEGFBP49765 207 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 PMS2P54278 862 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 TIGD5Q53EQ6 642 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 GLRA4Q5JXX5 417 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 CCDC89Q8N998 374 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 APBB2Q92870 758 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 CENPTQ96BT3 561 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 ATP6V1G3Q96LB4 118 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 ZCWPW1Q9H0M4 648 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 CNGB3Q9NQW8 809 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 TRMT13Q9NUP7 481 aaKnown RBP7.5□□□□□ -1.21
NPHP1-201ENST00000316534 COMMD8Q9NX08 183 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 KLK14Q9P0G3 267 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 DNPEPQ9ULA0 475 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 SHOC2Q9UQ13 582 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 FAN1Q9Y2M0 1017 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 BEST1O76090 585 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 CD19P15391 556 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 NR2C2P49116 596 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 DAOAP59103 153 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 RAB6CQ53S08 254 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 INTS6LQ5JSJ4 861 aaKnown RBP7.5□□□□□ -1.21
NPHP1-201ENST00000316534 FAM102AQ5T9C2 384 aaPredicted RBP7.5□□□□□ -1.21
NPHP1-201ENST00000316534 SH3PXD2AQ5TCZ1 1133 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 TWF2Q6IBS0 349 aaKnown RBP7.5□□□□□ -1.21
NPHP1-201ENST00000316534 DCUN1D2Q6PH85 259 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 C4orf22Q6V702 233 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 C1orf54Q8WWF1 131 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 PRCCQ92733 491 aaPredicted RBP7.5□□□□□ -1.21
NPHP1-201ENST00000316534 ARL8AQ96BM9 186 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 OXCT2Q9BYC2 517 aaPredicted RBP7.5□□□□□ -1.21
NPHP1-201ENST00000316534 RAB6CQ9H0N0 254 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 CCDC134Q9H6E4 229 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 WDR6Q9NNW5 1121 aaKnown RBP7.5□□□□□ -1.21
NPHP1-201ENST00000316534 PLAAQ9Y263 795 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 B4GALT3O60512 393 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 CD48P09326 243 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 NOS2P35228 1153 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 THPOP40225 353 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 DPYSQ14117 519 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 PAFAH1B3Q15102 231 aaKnown RBP7.5□□□□□ -1.21
NPHP1-201ENST00000316534 ANKRD20A8PQ5CZ79 823 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 WSCD1Q658N2 575 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 SLC24A5Q71RS6 500 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 FAM35AQ86V20 835 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 SLC2A14Q8TDB8 520 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 FATE1Q969F0 183 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 GAD1Q99259 594 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 LPIN3Q9BQK8 851 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 SNX25Q9H3E2 840 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 LRRC4CQ9HCJ2 640 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 TTC3P53804 2025 aa7.5□□□□□ -1.21
NPHP1-201ENST00000316534 PARNO95453 639 aaKnown RBP7.49□□□□□ -1.21
NPHP1-201ENST00000316534 ODC1P11926 461 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 DNA2P51530 1060 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 SLC18A1P54219 525 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 TNK2Q07912 1038 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 KCNJ11Q14654 390 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 TAF5Q15542 800 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 TCTN1Q2MV58 587 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 ERMARDQ5T6L9 678 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 PCGF5Q86SE9 256 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 EMC1Q8N766 993 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 IFT81Q8WYA0 676 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 ATG4AQ8WYN0 398 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 CASD1Q96PB1 797 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 TMEM175Q9BSA9 504 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 RC3H2Q9HBD1 1191 aaKnown RBP7.49□□□□□ -1.21
NPHP1-201ENST00000316534 TMEM161AQ9NX61 479 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 SNX24Q9Y343 169 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 ALOX15BO15296 676 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 GAS8O95995 478 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 GCAP28676 217 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 HTR7P34969 479 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 MAGEA11P43364 429 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 KCNJ1P48048 391 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 PRKD1Q15139 912 aaPredicted RBP7.49□□□□□ -1.21
NPHP1-201ENST00000316534 PHLDB2Q86SQ0 1253 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 PIGZQ86VD9 579 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 GLIS1Q8NBF1 620 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 PCDH19Q8TAB3 1148 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 PCED1BQ96HM7 432 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 TOX2Q96NM4 488 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 WDR83Q9BRX9 315 aaKnown RBP7.49□□□□□ -1.21
NPHP1-201ENST00000316534 SNRNP25Q9BV90 132 aaKnown RBP7.49□□□□□ -1.21
NPHP1-201ENST00000316534 PPCSQ9HAB8 311 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 HMX1Q9NP08 348 aaPredicted RBP7.49□□□□□ -1.21
NPHP1-201ENST00000316534 ARHGEF38Q9NXL2 777 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 SRCAPQ6ZRS2 3230 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 ARHGEF37A1IGU5 675 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 NBNO60934 754 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 GCATO75600 419 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 KRT10P13645 584 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 PDGFRAP16234 1089 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 CHKAP35790 457 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 CETN2P41208 172 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 SCNN1GP51170 649 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 CACNA2D1P54289 1103 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 ZNF33AQ06730 810 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 P3H1Q32P28 736 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms