RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 FYNP06241 537 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 CD48P09326 243 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 EN2P19622 333 aaPredicted RBP16.47■□□□□ 0.23
CALR-201ENST00000316448 SCNN1AP37088 669 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 PITX1P78337 314 aaPredicted RBP16.47■□□□□ 0.23
CALR-201ENST00000316448 TERF2Q15554 542 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 RSPO2Q6UXX9 243 aaPredicted RBP16.47■□□□□ 0.23
CALR-201ENST00000316448 BHLHA9Q7RTU4 235 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 CEP57Q86XR8 500 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 CCDC50Q8IVM0 306 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 RCOR2Q8IZ40 523 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 IQCKQ8N0W5 287 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 C1orf54Q8WWF1 131 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 SMARCD1Q96GM5 515 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 TMEM106CQ9BVX2 250 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 COLEC11Q9BWP8 271 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 MAGEB5Q9BZ81 275 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 ZCWPW1Q9H0M4 648 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 DPH5Q9H2P9 285 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 LRRC4Q9HBW1 653 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 USP18Q9UMW8 372 aa16.47■□□□□ 0.23
CALR-201ENST00000316448 FGFR3P22607 806 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 PCK1P35558 622 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 KCNJ1P48048 391 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 HDAC4P56524 1084 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 SNX16P57768 344 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 FAM193AP78312 1265 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 ACAP1Q15027 740 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 SPOCD1Q6ZMY3 1216 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 POLNQ7Z5Q5 900 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 DEFB106AQ8N104 65 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 FAM172AQ8WUF8 416 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 PIK3R5Q8WYR1 880 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 RBM41Q96IZ5 413 aaKnown RBP16.46■□□□□ 0.23
CALR-201ENST00000316448 FAM118BQ9BPY3 351 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 DDX23Q9BUQ8 820 aaKnown RBP16.46■□□□□ 0.23
CALR-201ENST00000316448 CHST7Q9NS84 486 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 GRHL1Q9NZI5 618 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 NLRC5Q86WI3 1866 aa16.46■□□□□ 0.23
CALR-201ENST00000316448 HSF2BPO75031 334 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 RNF40O75150 1001 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 RNF8O76064 485 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 CYP2F1P24903 491 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 GBP1P32455 592 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 PTPN7P35236 360 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 RFC2P35250 354 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 CDKN2BP42772 138 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 SLC8A3P57103 927 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 TSPY1Q01534 308 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 SLC39A12Q504Y0 691 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 OTUD1Q5VV17 481 aaPredicted RBP16.45■□□□□ 0.22
CALR-201ENST00000316448 FAM117BQ6P1L5 589 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 FUT10Q6P4F1 479 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 ARCQ7LC44 396 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 UBE2Q1Q7Z7E8 422 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 CMASQ8NFW8 434 aaPredicted RBP16.45■□□□□ 0.22
CALR-201ENST00000316448 ATG4AQ8WYN0 398 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 RIN2Q8WYP3 895 aaPredicted RBP16.45■□□□□ 0.22
CALR-201ENST00000316448 CENPIQ92674 756 aaPredicted RBP16.45■□□□□ 0.22
CALR-201ENST00000316448 TOP1MTQ969P6 601 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 ZBTB9Q96C00 473 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 TMEM175Q9BSA9 504 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 NGRNQ9NPE2 291 aaKnown RBP16.45■□□□□ 0.22
CALR-201ENST00000316448 ARHGEF37A1IGU5 675 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 LRRD1A4D1F6 860 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 YJEFN3A6XGL0 299 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 E7ENQ6 273 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 SYN3O14994 580 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 TRAPPC3O43617 180 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 EFEMP2O95967 443 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 USP17L7P0C7H9 530 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 KDELR1P24390 212 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 SDC4P31431 198 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 PTPN9P43378 593 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 ARSEP51690 589 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 DAOAP59103 153 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 HADHQ16836 314 aaKnown RBP16.45■□□□□ 0.22
CALR-201ENST00000316448 RTP2Q5QGT7 225 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 ZFYVE27Q5T4F4 411 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 SYPL2Q5VXT5 272 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 KAZNQ674X7 775 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 ZDHHC24Q6UX98 284 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 C16orf59Q7L2K0 433 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 TMC3Q7Z5M5 1100 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 CCDC105Q8IYK2 499 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 LRRC45Q96CN5 670 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 ZIM3Q96PE6 472 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 TBCBQ99426 244 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 FMO2Q99518 471 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 VN1R3Q9BXE9 311 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 MRPL9Q9BYD2 267 aaKnown RBP16.45■□□□□ 0.22
CALR-201ENST00000316448 TRIM31Q9BZY9 425 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 DCLK3Q9C098 648 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 GPATCH2LQ9NWQ4 482 aa16.45■□□□□ 0.22
CALR-201ENST00000316448 DDX56Q9NY93 547 aaKnown RBP16.45■□□□□ 0.22
CALR-201ENST00000316448 hCG_1818297A0A087WSY0 165 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 ECEL1O95672 775 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 RAG1P15918 1043 aa16.44■□□□□ 0.22
CALR-201ENST00000316448 RPL21P46778 160 aaKnown RBP16.44■□□□□ 0.22
CALR-201ENST00000316448 SNX1Q13596 522 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms