RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 APOL5Q9BWW9 433 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 SYNCQ9H7C4 482 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 PIDD1Q9HB75 910 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 NMUR1Q9HB89 426 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 WDR6Q9NNW5 1121 aaKnown RBP13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 ASNSD1Q9NWL6 643 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 GMIPQ9P107 970 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 CDH22Q9UJ99 828 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 STRIP2Q9ULQ0 834 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 PATJQ8NI35 1801 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 NCOR1O75376 2440 aa13.29□□□□□ -0.28
CHMP2A-201ENST00000312547 YJEFN3A6XGL0 299 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 E7ENQ6 273 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 ARHGAP6O43182 974 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 SART1O43290 800 aaKnown RBP13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 GLI1P08151 1106 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 GABRR2P28476 465 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 PPP3CCP48454 512 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 SLC6A3Q01959 620 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 SLC5A9Q2M3M2 681 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 PABPC1LQ4VXU2 614 aaKnown RBP13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 ATAT1Q5SQI0 421 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 C10orf76Q5T2E6 689 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 CES5AQ6NT32 575 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 EP400NLQ6ZTU2 488 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 HFE2Q6ZVN8 426 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 BEND5Q7L4P6 421 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 SLC26A9Q7LBE3 791 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 SHKBP1Q8TBC3 707 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 PPM1EQ8WY54 764 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 HLA-CQ95604 372 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 TCEAL4Q96EI5 215 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 KCNF1Q9H3M0 494 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 OSER1Q9NX31 292 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 CLIC5Q9NZA1 410 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 TRPM5Q9NZQ8 1165 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 WDR35Q9P2L0 1181 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 CHORDC1Q9UHD1 332 aaPredicted RBP13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 CD207Q9UJ71 328 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 COG5Q9UP83 839 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 REXO2Q9Y3B8 237 aaKnown RBP13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 XIRP2A4UGR9 3374 aa13.28□□□□□ -0.28
CHMP2A-201ENST00000312547 A0A1W2PQH9 124 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 ANKRD62A6NC57 917 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 H3BQ06 376 aaPredicted RBP13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 ZNF197O14709 1029 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 FYNP06241 537 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 PTMAP06454 111 aaKnown RBP13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 H2AFZP0C0S5 128 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 MYBL1P10243 752 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 MYL4P12829 197 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 KCNA5P22460 613 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 RRM1P23921 792 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 CDC25CP30307 473 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 MTHFRP42898 656 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 PSEN1P49768 467 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 GALCP54803 685 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 SKIV2LQ15477 1246 aaKnown RBP13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 TAF5Q15542 800 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 PPP1R15BQ5SWA1 713 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 BSPRYQ5W0U4 402 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 OR6B2Q6IFH4 312 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 PLEKHA7Q6IQ23 1121 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 TOGARAM2Q6ZUX3 1019 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 H2AFVQ71UI9 128 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 PDZD4Q76G19 769 aaPredicted RBP13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 ARCQ7LC44 396 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 ARHGAP18Q8N392 663 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 ZNF276Q8N554 614 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 C3orf20Q8ND61 904 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 MAFAQ8NHW3 353 aaPredicted RBP13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 TRIM11Q96F44 468 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 RIPOR3Q96MK2 946 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 PACSIN1Q9BY11 444 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 TLR8Q9NR97 1041 aaKnown RBP13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 TMEM59LQ9UK28 342 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 INTUQ9ULD6 942 aa13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 USP15Q9Y4E8 981 aaPredicted RBP13.27□□□□□ -0.29
CHMP2A-201ENST00000312547 A0A1W2PRU2 124 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 GRXCR2A6NFK2 248 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 SOBPA7XYQ1 873 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 CLUHO75153 1309 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 OLFM2O95897 454 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 LTFP02788 710 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 CYP1A2P05177 515 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 TMEM253P0C7T8 217 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 MAGEA1P43355 309 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 TUBP50607 506 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 YWHAGP61981 247 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 YWHAZP63104 245 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 SMAD4Q13485 552 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 SPA17Q15506 151 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 CLUL1Q15846 466 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 LEXMQ3ZCV2 418 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 EFHC1Q5JVL4 640 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 FAM102AQ5T9C2 384 aaPredicted RBP13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 POTEHQ6S545 545 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 ACRBPQ8NEB7 543 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 ITFG1Q8TB96 612 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 ZNF653Q96CK0 615 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms