RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CHAMP1Q96JM3 812 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 FANCEQ9HB96 536 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 GTSE1Q9NYZ3 720 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 MORF4L1Q9UBU8 362 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 MAP1BP46821 2468 aaKnown RBP9.11□□□□□ -0.95
COL6A5-202ENST00000312481 CCDC154A6NI56 674 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 HOXA2O43364 376 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 KRT6AP02538 564 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 KRT6BP04259 564 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 FCER1AP12319 257 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 ITKQ08881 620 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 ARID5BQ14865 1188 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 ADCK1Q86TW2 530 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 REPS1Q96D71 796 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 CGRRF1Q99675 332 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 RETREG1Q9H6L5 497 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 RAB26Q9ULW5 256 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 MED26O95402 600 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 GLI1P08151 1106 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 RAB27AP51159 221 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 LRRC41Q15345 812 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 DIXDC1Q155Q3 683 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 SUSD4Q5VX71 490 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 SLC16A10Q8TF71 515 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 TEKT4Q8WW24 435 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 DYDC2Q96IM9 177 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 SMYD2Q9NRG4 433 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 KRT82Q9NSB4 513 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 GEMP55040 296 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 STXBP5Q5T5C0 1151 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 ADAT2Q7Z6V5 191 aaKnown RBP9.1□□□□□ -0.95
COL6A5-202ENST00000312481 NT5DC3Q86UY8 548 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 HSPH1Q92598 858 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 PTCD3Q96EY7 689 aaKnown RBP9.1□□□□□ -0.95
COL6A5-202ENST00000312481 LGALS13Q9UHV8 139 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 SPAG17Q6Q759 2223 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 KPNA5O15131 536 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 PDHA1P08559 390 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 PPIBP23284 216 aaKnown RBP9.1□□□□□ -0.95
COL6A5-202ENST00000312481 FASP25445 335 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 IFNGR2P38484 337 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 RPL5P46777 297 aaKnown RBP9.1□□□□□ -0.95
COL6A5-202ENST00000312481 CMPK2Q5EBM0 449 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 LUZP2Q86TE4 346 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 SNX19Q92543 992 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 COA7Q96BR5 231 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 HES6Q96HZ4 224 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 EMILIN2Q9BXX0 1053 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 ATP11BQ9Y2G3 1177 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 RASA1P20936 1047 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 FGFR2P21802 821 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 LHX1P48742 406 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 KIAA0408Q6ZU52 694 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 NANOGNBQ7Z5D8 188 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 MRRFQ96E11 262 aaKnown RBP9.1□□□□□ -0.95
COL6A5-202ENST00000312481 COMMD8Q9NX08 183 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 PDIA6Q15084 440 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 FASTKD1Q53R41 847 aaKnown RBP9.1□□□□□ -0.95
COL6A5-202ENST00000312481 ARHGAP22Q7Z5H3 698 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 MROH8Q9H579 483 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 TMEM216Q9P0N5 145 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 DCTN4Q9UJW0 460 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 ZNF180Q9UJW8 692 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 B2RBV5 119 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 M0QYV0 167 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 CRTAMO95727 393 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 IL1R1P14778 569 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 PTPN7P35236 360 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 RAP1GDS1P52306 607 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 ERVK-24P63145 666 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 MMRN1Q13201 1228 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 CLEC16AQ2KHT3 1053 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 PDPK2PQ6A1A2 396 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 ZNF333Q96JL9 665 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 ARMC7Q9H6L4 198 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 CD320Q9NPF0 282 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 GIMAP4Q9NUV9 329 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 MBD2Q9UBB5 411 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 BCL9O00512 1426 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 A0A087X0T9 212 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 FAM228BP0C875 321 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 UMPSP11172 480 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 LYPLAL1Q5VWZ2 237 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 Q96MT0 163 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 THTPAQ9BU02 230 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 CDC42EP4Q9H3Q1 356 aaKnown RBP9.1□□□□□ -0.95
COL6A5-202ENST00000312481 TCF7L2Q9NQB0 619 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 FNIP2Q9P278 1114 aa9.1□□□□□ -0.95
COL6A5-202ENST00000312481 SEC16AO15027 2179 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 PRKAB2O43741 272 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 STX11O75558 287 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 PGAM1P18669 254 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 FGFR4P22455 802 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 ZNF235Q14590 738 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 VPS72Q15906 364 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 RASGRP4Q8TDF6 673 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 TP53INP1Q96A56 240 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 YTHDF1Q9BYJ9 559 aaKnown RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 SYNDIG1Q9H7V2 258 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 USE1Q9NZ43 259 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms