RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 MDM4O15151 490 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 EOMESO95936 686 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 ZSCAN5DPP0CG00 497 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 ETS1P14921 441 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 MRPS5P82675 430 aaKnown RBP22.2■■□□□ 1.14
ATG4D-201ENST00000309469 TFDP2Q14188 446 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 P3H1Q32P28 736 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 ZC3H12AQ5D1E8 599 aaKnown RBP22.2■■□□□ 1.14
ATG4D-201ENST00000309469 DENND2CQ68D51 928 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 FAM35AQ86V20 835 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 NDRG1Q92597 394 aaKnown RBP22.2■■□□□ 1.14
ATG4D-201ENST00000309469 RNF157Q96PX1 679 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 RTP3Q9BQQ7 232 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 SNRNP25Q9BV90 132 aaKnown RBP22.2■■□□□ 1.14
ATG4D-201ENST00000309469 GPATCH2LQ9NWQ4 482 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 HTTP42858 3142 aa22.2■■□□□ 1.14
ATG4D-201ENST00000309469 KBTBD13C9JR72 458 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 SGK1O00141 431 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 CYP11A1P05108 521 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 IL4RP24394 825 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 CHKAP35790 457 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 MATKP42679 507 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 IFFO1Q0D2I5 559 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 SLC29A2Q14542 456 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 DCLRE1AQ6PJP8 1040 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 ADAM33Q9BZ11 813 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 PCDH18Q9HCL0 1135 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 DSEQ9UL01 958 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 HMGB1P1B2RPK0 211 aaPredicted RBP22.19■■□□□ 1.14
ATG4D-201ENST00000309469 M0QZQ0 153 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 AP1G2O75843 785 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 PECAM1P16284 738 aaPredicted RBP22.19■■□□□ 1.14
ATG4D-201ENST00000309469 NDUFV1P49821 464 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 YWHAZP63104 245 aaKnown RBP22.19■■□□□ 1.14
ATG4D-201ENST00000309469 FAM189BP81408 668 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 CA9Q16790 459 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 ERMARDQ5T6L9 678 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 HIBCHQ6NVY1 386 aaPredicted RBP22.19■■□□□ 1.14
ATG4D-201ENST00000309469 GLB1LQ6UWU2 654 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 TRMT10CQ7L0Y3 403 aaKnown RBP22.19■■□□□ 1.14
ATG4D-201ENST00000309469 DEFB106AQ8N104 65 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 SIX6OS1Q8N1H7 587 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 SH2D3CQ8N5H7 860 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 LINC01599Q8WXQ3 324 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 RSPH1Q8WYR4 309 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 FAM149B1Q96BN6 582 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 SMOQ99835 787 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 ACBD6Q9BR61 282 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.19■■□□□ 1.14
ATG4D-201ENST00000309469 PCDH9Q9HC56 1237 aa22.19■■□□□ 1.14
ATG4D-201ENST00000309469 DNALI1O14645 258 aaPredicted RBP22.18■■□□□ 1.14
ATG4D-201ENST00000309469 RIPK2O43353 540 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 DAB1O75553 588 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 TKTL1P51854 596 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 EIF3EP60228 445 aaKnown RBP22.18■■□□□ 1.14
ATG4D-201ENST00000309469 HTRA3P83110 453 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 GPS1Q13098 491 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 STRADAQ7RTN6 431 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 VSIG1Q86XK7 387 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 HASPINQ8TF76 798 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 ADAM7Q9H2U9 754 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 CENPHQ9H3R5 247 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 SHBGP04278 402 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 ATXN1P54253 815 aaKnown RBP22.18■■□□□ 1.14
ATG4D-201ENST00000309469 SLC25A52Q3SY17 297 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 ANKRD20A8PQ5CZ79 823 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.18■■□□□ 1.14
ATG4D-201ENST00000309469 PKNOX2Q96KN3 472 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 SAGE1Q9NXZ1 904 aa22.18■■□□□ 1.14
ATG4D-201ENST00000309469 MCF2LO15068 1137 aa22.17■■□□□ 1.14
ATG4D-201ENST00000309469 IFNB1P01574 187 aa22.17■■□□□ 1.14
ATG4D-201ENST00000309469 CDK7P50613 346 aa22.17■■□□□ 1.14
ATG4D-201ENST00000309469 FAM171BQ6P995 826 aa22.17■■□□□ 1.14
ATG4D-201ENST00000309469 LRRC8DQ7L1W4 858 aa22.17■■□□□ 1.14
ATG4D-201ENST00000309469 ZMIZ2Q8NF64 920 aa22.17■■□□□ 1.14
ATG4D-201ENST00000309469 SH3TC2Q8TF17 1288 aa22.17■■□□□ 1.14
ATG4D-201ENST00000309469 KCNK16Q96T55 309 aa22.17■■□□□ 1.14
ATG4D-201ENST00000309469 C10orf88Q9H8K7 445 aa22.17■■□□□ 1.14
ATG4D-201ENST00000309469 PRDM4Q9UKN5 801 aa22.17■■□□□ 1.14
ATG4D-201ENST00000309469 TPX2Q9ULW0 747 aaKnown RBP22.17■■□□□ 1.14
ATG4D-201ENST00000309469 TRIM17Q9Y577 477 aa22.17■■□□□ 1.14
ATG4D-201ENST00000309469 ERICH4A6NGS2 130 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 FBXO21O94952 628 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 SELPP16109 830 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 CAPN2P17655 700 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 NOS2P35228 1153 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 SULT1E1P49888 294 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 CACNA2D1P54289 1103 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 NOMO1Q15155 1222 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 KRT71Q3SY84 523 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 DCAF6Q58WW2 860 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 CLLU1OSQ5K130 101 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 UBAP2Q5T6F2 1119 aaKnown RBP22.16■■□□□ 1.14
ATG4D-201ENST00000309469 NPNTQ6UXI9 565 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 RSAD2Q8WXG1 361 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 P3H4Q92791 437 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 MYLPFQ96A32 169 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 SMARCD1Q96GM5 515 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 SUSD3Q96L08 255 aa22.16■■□□□ 1.14
ATG4D-201ENST00000309469 ZNF670Q9BS34 389 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms