RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TFDP3Q5H9I0 405 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 FAXCQ5TGI0 409 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 C4orf22Q6V702 233 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 TNS4Q8IZW8 715 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 PNKPQ96T60 521 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 BRD8Q9H0E9 1235 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 ZDHHC6Q9H6R6 413 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 TRIM10Q9UDY6 481 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 LNPEPQ9UIQ6 1025 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 ALG6Q9Y672 507 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 SPACA6W5XKT8 324 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 EMC1Q8N766 993 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 ZNF669Q96BR6 464 aaPredicted RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 TMEM134Q9H6X4 195 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 PKD2L2Q9NZM6 624 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 ZMYM2Q9UBW7 1377 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 NFAT5O94916 1531 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 PIK3CDO00329 1044 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 IGSF6O95976 241 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 CCL5P13501 91 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 CARSP49589 748 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 PCBP1Q15365 356 aaKnown RBP eCLIP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 CCDC85BQ15834 202 aaPredicted RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 NTRK3Q16288 839 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 POM121L1PQ3SYA9 428 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 AARS2Q5JTZ9 985 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 ALG13Q9NP73 1137 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 ADA2Q9NZK5 511 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 KAT6AQ92794 2004 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 ACRP10323 421 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 MYL2P10916 166 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 PTPN1P18031 435 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 GRK3P35626 688 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 TATDN1Q6P1N9 297 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 FBXL19Q6PCT2 694 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 C3orf62Q6ZUJ4 267 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 NT5DC3Q86UY8 548 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 CELF6Q96J87 481 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 CCDC138Q96M89 665 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 CNPY3Q9BT09 278 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 CLPBQ9H078 707 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 COPS7BQ9H9Q2 264 aaPredicted RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 OLFML3Q9NRN5 406 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 RWDD3Q9Y3V2 267 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 LRRIQ3A6PVS8 624 aaPredicted RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 AKAP3O75969 853 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 TRIM16O95361 564 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 LSM8O95777 96 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 TGM2P21980 687 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 MAGOHP61326 146 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 CASP8Q14790 479 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 DCLRE1AQ6PJP8 1040 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 SPATS2Q86XZ4 545 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 TXLNGQ9NUQ3 528 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 FAM105AQ9NUU6 356 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 KBTBD4Q9NVX7 518 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 MARCH2Q9P0N8 246 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 SPASTQ9UBP0 616 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 DCTN4Q9UJW0 460 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 ATRNO75882 1429 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 FRMD3A2A2Y4 597 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 SPECC1L-ADORA2AF8WAN1 911 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 MAFO75444 373 aaPredicted RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 GLRA2P23416 452 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 AARSP49588 968 aaKnown RBP eCLIP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 HECTD3Q5T447 861 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 RETSATQ6NUM9 610 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 FAM136AQ96C01 138 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 OTUB1Q96FW1 271 aaPredicted RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 FAM96AQ9H5X1 160 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 BRD9Q9H8M2 597 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 TDRKHQ9Y2W6 561 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 MRNIPQ6NTE8 343 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 RBM15Q96T37 977 aaKnown RBP eCLIP11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 ABCC13Q9NSE7 274 aa11.07□□□□□ -0.64
SYNPO2-201ENST00000307142 FRMPD4Q14CM0 1322 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 MEIS2O14770 477 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 TREHO43280 583 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 DYRK3O43781 588 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 SPRP35270 261 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 HIRAP54198 1017 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 TRMT11Q7Z4G4 463 aaKnown RBP11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 DENND1CQ8IV53 801 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 HIPK4Q8NE63 616 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 PPP1R16AQ96I34 528 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 FICDQ9BVA6 458 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 RNF112Q9ULX5 631 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 GIT1Q9Y2X7 761 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 MEI4A8MW99 385 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 LAG3P18627 525 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 LPCAT1Q8NF37 534 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 IL31RAQ8NI17 732 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 TRIM51Q9BSJ1 452 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 PCMTD2Q9NV79 361 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 UBIAD1Q9Y5Z9 338 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 ADAMTSL3P82987 1691 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 SMIM22K7EJ46 135 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 NFKBIEO00221 500 aa11.06□□□□□ -0.64
SYNPO2-201ENST00000307142 EEF1B2P24534 225 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms