RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 MMEL1Q495T6 779 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 SPATA2LQ8IUW3 424 aaPredicted RBP11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 LRRC52Q8N7C0 313 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 TEPSINQ96N21 525 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 CATSPERBQ9H7T0 1116 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZDHHC18Q9NUE0 388 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 SETD4Q9NVD3 440 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 ADGRA3Q8IWK6 1321 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 CNTNAP2Q9UHC6 1331 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 TYW5A2RUC4 315 aaKnown RBP11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 E5RJQ4 531 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 M0QYT0 321 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 GLRA3O75311 464 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 ODC1P11926 461 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 ALADP13716 330 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 CHKAP35790 457 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 DCAF12L1Q5VU92 463 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 EXOC3L1Q86VI1 746 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 SCN4BQ8IWT1 228 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZSWIM2Q8NEG5 633 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 PPHLN1Q8NEY8 458 aaKnown RBP11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 SNX3O60493 162 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 KLHL2O95198 593 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 ELK3P41970 407 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 NAB1Q13506 487 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 ACVR2BQ13705 512 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 MTFR1Q15390 333 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 NLRP9Q7RTR0 991 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 RPAINQ86UA6 219 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 N4BP2L2Q92802 583 aaPredicted RBP11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 NSL1Q96IY1 281 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 GBA2Q9HCG7 927 aaPredicted RBP11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 ALG13Q9NP73 1137 aaKnown RBP11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 MRPL40Q9NQ50 206 aaKnown RBP11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 DCDC2Q9UHG0 476 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 DLEC1Q9Y238 1755 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 CYB561D2O14569 222 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 GPR182O15218 404 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 EEF1DP3Q658K8 133 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 TTC8Q8TAM2 541 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 HSFY1Q96LI6 401 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 FAM111AQ96PZ2 611 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 KLF6Q99612 283 aaPredicted RBP11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 MAGED2Q9UNF1 606 aaPredicted RBP11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 STARD13Q9Y3M8 1113 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 A0A0G2JLL6 359 aaPredicted RBP11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 SOWAHBA6NEL2 793 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 OPHN1O60890 802 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 APOA4P06727 396 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 CDK16Q00536 496 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 LAMB3Q13751 1172 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 SYCP2LQ5T4T6 812 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 KIAA1841Q6NSI8 718 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 TAF2Q6P1X5 1199 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 PRRT2Q7Z6L0 340 aaPredicted RBP11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 ATPAF2Q8N5M1 289 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 APOPT1Q96IL0 206 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 GBP5Q96PP8 586 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 OSMRQ99650 979 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 ADAM33Q9BZ11 813 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 NOD2Q9HC29 1040 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 GPATCH2LQ9NWQ4 482 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 BTBD7Q9P203 1132 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 DSEQ9UL01 958 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 SNCAIPQ9Y6H5 919 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 UBOX5O94941 541 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 ATP5BP06576 529 aaKnown RBP11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 KITP10721 976 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 HSDL1Q3SXM5 330 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 LONP2Q86WA8 852 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 COPS5Q92905 334 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZNF670Q9BS34 389 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 GPR88Q9GZN0 384 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 NR2E1Q9Y466 385 aa11.29□□□□□ -0.6
PCDHGC4-201ENST00000306593 ATG7O95352 703 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 VNN1O95497 513 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 NCAM1P13591 858 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 ADCYAP1R1P41586 468 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 AP2B1P63010 937 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 ATP13A4Q4VNC1 1196 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 SLC39A4Q6P5W5 647 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 SUGP1Q8IWZ8 645 aaKnown RBP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 NIPA2Q8N8Q9 360 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 RNF157Q96PX1 679 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 APOBEC3GQ9HC16 384 aaKnown RBP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 TCRBV7S2A1N4TA0A589 114 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 STK25O00506 426 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 CILPO75339 1184 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 CSDE1O75534 798 aaKnown RBP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 AP1G2O75843 785 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 CYP2B6P20813 491 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 PKN2Q16513 984 aaKnown RBP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 DCP1BQ8IZD4 617 aaKnown RBP11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 TEKT4Q8WW24 435 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 SEC14L1Q92503 715 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 KLK14Q9P0G3 267 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 B4GALT5O43286 388 aa11.28□□□□□ -0.6
PCDHGC4-201ENST00000306593 H2AFYO75367 372 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms