RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ASNSD1Q9NWL6 643 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 PAK5Q9P286 719 aa13.52□□□□□ -0.25
TRIM35-201ENST00000305364 IGLV3-22A0A075B6J6 115 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 SEC24DO94855 1032 aaPredicted RBP13.51□□□□□ -0.25
TRIM35-201ENST00000305364 SLC1A6P48664 564 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 RAP1GDS1P52306 607 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 C16orf72Q14CZ0 275 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 RELL1Q8IUW5 271 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 ACER1Q8TDN7 264 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 EBF4Q9BQW3 602 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 COPS7BQ9H9Q2 264 aaPredicted RBP13.51□□□□□ -0.25
TRIM35-201ENST00000305364 MYH11P35749 1972 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 CACNA1SQ13698 1873 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 A0A0B4J269 797 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 GOLGA8QA0A0J9YX86 632 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 GOLGA8OA6NCC3 632 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 GOLGA8NF8WBI6 632 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 MED7O43513 233 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 PEX1O43933 1283 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 PSMC3P17980 439 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 PHEXP78562 749 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 PTP4A2Q12974 167 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 MSS51Q4VC12 460 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 SFT2D3Q587I9 215 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 SLFN12LQ6IEE8 588 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 CHSY1Q86X52 802 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 CCDC33Q8N5R6 958 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 FBXO27Q8NI29 283 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 SLC7A3Q8WY07 619 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 EXTL3O43909 919 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 LDHAP00338 332 aaKnown RBP13.51□□□□□ -0.25
TRIM35-201ENST00000305364 SERPINB9P50453 376 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 KRT76Q01546 638 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 KLF1Q13351 362 aaPredicted RBP13.51□□□□□ -0.25
TRIM35-201ENST00000305364 PEX6Q13608 980 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 ZNF699Q32M78 642 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 LRRC8BQ6P9F7 803 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 MON1BQ7L1V2 547 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 FAM172AQ8WUF8 416 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 GMCL1Q96IK5 515 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 ZFRQ96KR1 1074 aaKnown RBP13.51□□□□□ -0.25
TRIM35-201ENST00000305364 AGBL1Q96MI9 1066 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRIM35-201ENST00000305364 CLUHO75153 1309 aa13.51□□□□□ -0.25
TRIM35-201ENST00000305364 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 MMP10P09238 476 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 MCF2P10911 925 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 FGFR1P11362 822 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 MSX2P35548 267 aaPredicted RBP13.5□□□□□ -0.25
TRIM35-201ENST00000305364 GDF10P55107 478 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 TBC1D25Q3MII6 688 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 KCTD21Q4G0X4 260 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 N4BP2L1Q5TBK1 243 aaPredicted RBP13.5□□□□□ -0.25
TRIM35-201ENST00000305364 SLC44A1Q8WWI5 657 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 USP13Q92995 863 aaPredicted RBP13.5□□□□□ -0.25
TRIM35-201ENST00000305364 EFHD1Q9BUP0 239 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 DDX60Q8IY21 1712 aaKnown RBP13.5□□□□□ -0.25
TRIM35-201ENST00000305364 GRAP2O75791 330 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 ITGA9Q13797 1035 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 FOXB2Q5VYV0 432 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 LPCAT2Q7L5N7 544 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 FAM160B2Q86V87 743 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 TMEM143Q96AN5 459 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 NRDE2Q9H7Z3 1164 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 RSAD1Q9HA92 442 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 RAVER2Q9HCJ3 691 aaKnown RBP13.5□□□□□ -0.25
TRIM35-201ENST00000305364 CFHP08603 1231 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 THNSL1Q8IYQ7 743 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 CCNYQ8ND76 341 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 PHF12Q96QT6 1004 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 DCUN1D5Q9BTE7 237 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 TARS2Q9BW92 718 aaKnown RBP13.5□□□□□ -0.25
TRIM35-201ENST00000305364 PLLPQ9Y342 182 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 GPC4O75487 556 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 GCAP28676 217 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 CRABP2P29373 138 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 NRLP54845 237 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 LSAMPQ13449 338 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 PRKG1Q13976 671 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 C12orf56Q8IXR9 622 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 DCAKDQ8WVC6 231 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 C20orf96Q9NUD7 363 aaPredicted RBP13.5□□□□□ -0.25
TRIM35-201ENST00000305364 HBS1LQ9Y450 684 aaKnown RBP13.5□□□□□ -0.25
TRIM35-201ENST00000305364 PCDHA10Q9Y5I2 948 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 AP4B1Q9Y6B7 739 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 SNCAIPQ9Y6H5 919 aa13.5□□□□□ -0.25
TRIM35-201ENST00000305364 MYPNQ86TC9 1320 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 ZNF142P52746 1687 aaPredicted RBP13.49□□□□□ -0.25
TRIM35-201ENST00000305364 SFNP31947 248 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 RFC1P35251 1148 aaPredicted RBP13.49□□□□□ -0.25
TRIM35-201ENST00000305364 FDFT1P37268 417 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 TPD52P55327 224 aaPredicted RBP13.49□□□□□ -0.25
TRIM35-201ENST00000305364 SLC27A3Q5K4L6 730 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 HHIPL2Q6UWX4 724 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 MAP4K3Q8IVH8 894 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 RTKN2Q8IZC4 609 aa13.49□□□□□ -0.25
TRIM35-201ENST00000305364 NKD2Q969F2 451 aaPredicted RBP13.49□□□□□ -0.25
TRIM35-201ENST00000305364 TSPYL2Q9H2G4 693 aaPredicted RBP13.49□□□□□ -0.25
TRIM35-201ENST00000305364 MAN1C1Q9NR34 630 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms