RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CYLDQ9NQC7 956 aa27.88■■■□□ 2.05
CDKN2A-201ENST00000304494 SH3BP1Q9Y3L3 701 aa27.88■■■□□ 2.05
CDKN2A-201ENST00000304494 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.88■■■□□ 2.05
CDKN2A-201ENST00000304494 MYH10P35580 1976 aa27.88■■■□□ 2.05
CDKN2A-201ENST00000304494 ATG13O75143 517 aa27.87■■■□□ 2.05
CDKN2A-201ENST00000304494 PSEN1P49768 467 aa27.87■■■□□ 2.05
CDKN2A-201ENST00000304494 KCNH2Q12809 1159 aa27.87■■■□□ 2.05
CDKN2A-201ENST00000304494 CCDC186Q7Z3E2 898 aa27.87■■■□□ 2.05
CDKN2A-201ENST00000304494 OTUB2Q96DC9 234 aa27.87■■■□□ 2.05
CDKN2A-201ENST00000304494 KIAA1257Q9ULG3 409 aa27.87■■■□□ 2.05
CDKN2A-201ENST00000304494 LILRB5O75023 590 aa27.86■■■□□ 2.05
CDKN2A-201ENST00000304494 EGFP01133 1207 aa27.86■■■□□ 2.05
CDKN2A-201ENST00000304494 AFPP02771 609 aaKnown RBP27.86■■■□□ 2.05
CDKN2A-201ENST00000304494 ATP5C1P36542 298 aaKnown RBP27.86■■■□□ 2.05
CDKN2A-201ENST00000304494 SGO2Q562F6 1265 aa27.86■■■□□ 2.05
CDKN2A-201ENST00000304494 TADA2BQ86TJ2 420 aa27.86■■■□□ 2.05
CDKN2A-201ENST00000304494 CLSTN2Q9H4D0 955 aa27.86■■■□□ 2.05
CDKN2A-201ENST00000304494 FBRSL1Q9HCM7 1045 aaKnown RBP27.86■■■□□ 2.05
CDKN2A-201ENST00000304494 USP3Q9Y6I4 520 aa27.86■■■□□ 2.05
CDKN2A-201ENST00000304494 FANCMQ8IYD8 2048 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 ADH1CP00326 375 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 CYP17A1P05093 508 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 PGFP49763 221 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 GOLGA8FQ08AF8 430 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 GOLGA8DPQ0D2H9 430 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 DHCR24Q15392 516 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 KLHDC10Q6PID8 442 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 CLEC17AQ6ZS10 378 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 PPM1KQ8N3J5 372 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 UBR7Q8N806 425 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 MLKLQ8NB16 471 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 CCDC26Q8TAB7 109 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 HESX1Q9UBX0 185 aa27.85■■■□□ 2.05
CDKN2A-201ENST00000304494 VDRP11473 427 aa27.84■■■□□ 2.05
CDKN2A-201ENST00000304494 CD19P15391 556 aa27.84■■■□□ 2.05
CDKN2A-201ENST00000304494 BCAT1P54687 386 aa27.84■■■□□ 2.05
CDKN2A-201ENST00000304494 GOLGA7BQ2TAP0 167 aa27.84■■■□□ 2.05
CDKN2A-201ENST00000304494 NAIF1Q69YI7 327 aaPredicted RBP27.84■■■□□ 2.05
CDKN2A-201ENST00000304494 LMO3Q8TAP4 145 aa27.84■■■□□ 2.05
CDKN2A-201ENST00000304494 CDK5RAP1Q96SZ6 601 aaKnown RBP27.84■■■□□ 2.05
CDKN2A-201ENST00000304494 OSER1Q9NX31 292 aa27.84■■■□□ 2.05
CDKN2A-201ENST00000304494 NAGPAQ9UK23 515 aa27.84■■■□□ 2.05
CDKN2A-201ENST00000304494 TSPAN16Q9UKR8 245 aa27.84■■■□□ 2.05
CDKN2A-201ENST00000304494 MYO16Q9Y6X6 1858 aa27.84■■■□□ 2.05
CDKN2A-201ENST00000304494 A0A1W2PQH9 124 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 CHURC1-FNTBB4DL54 471 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 K7ESF4 209 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 SCAMP3O14828 347 aaKnown RBP27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 RNF40O75150 1001 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 PAEPP09466 180 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 RALAP11233 206 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 RARGP13631 454 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 PIGZQ86VD9 579 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 TTC30AQ86WT1 665 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 ARHGAP18Q8N392 663 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 ZNF276Q8N554 614 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 EHBP1Q8NDI1 1231 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 EPC1Q9H2F5 836 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 NMUR1Q9HB89 426 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 CLIC5Q9NZA1 410 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 PCDHB4Q9Y5E5 795 aa27.83■■■□□ 2.05
CDKN2A-201ENST00000304494 TBX18O95935 607 aa27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 IRF1P10914 325 aa27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 HOXA6P31267 233 aa27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 OPRD1P41143 372 aa27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 GCNT1Q02742 428 aa27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 BST2Q10589 180 aaKnown RBP27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 RAB41Q5JT25 222 aa27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 RHBDF2Q6PJF5 856 aa27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 TMEM270Q6UE05 265 aa27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 SUMF1Q8NBK3 374 aa27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 KLF16Q9BXK1 252 aaPredicted RBP27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 DNMT3LQ9UJW3 386 aa27.82■■■□□ 2.04
CDKN2A-201ENST00000304494 XPO1O14980 1071 aaKnown RBP27.81■■■□□ 2.04
CDKN2A-201ENST00000304494 ADH5P11766 374 aa27.81■■■□□ 2.04
CDKN2A-201ENST00000304494 EIF2DP41214 584 aaKnown RBP27.81■■■□□ 2.04
CDKN2A-201ENST00000304494 C10orf120Q5SQS8 335 aa27.81■■■□□ 2.04
CDKN2A-201ENST00000304494 SCD5Q86SK9 330 aa27.81■■■□□ 2.04
CDKN2A-201ENST00000304494 LSM7Q9UK45 103 aaKnown RBP27.81■■■□□ 2.04
CDKN2A-201ENST00000304494 SLC8A2Q9UPR5 921 aa27.81■■■□□ 2.04
CDKN2A-201ENST00000304494 GAD2Q05329 585 aa27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 PDE4CQ08493 712 aa27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 GAB4Q2WGN9 574 aa27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 PKN3Q6P5Z2 889 aa27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 HTR3DQ70Z44 454 aa27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 LONP2Q86WA8 852 aa27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 BBS7Q8IWZ6 715 aa27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 RUBCNQ92622 972 aa27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 CNOT6LQ96LI5 555 aaKnown RBP27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 INTS2Q9H0H0 1204 aaKnown RBP27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 NUP62CLQ9H1M0 184 aa27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 C2orf42Q9NWW7 574 aa27.8■■■□□ 2.04
CDKN2A-201ENST00000304494 O00370 1275 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 SETSIPP0DME0 302 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 CNR2P34972 360 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 PLA2G4AP47712 749 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 TKTL1P51854 596 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 STILQ15468 1287 aa27.79■■■□□ 2.04
CDKN2A-201ENST00000304494 RRAGAQ7L523 313 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms