RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TIGD7Q6NT04 549 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 ACTL9Q8TC94 416 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 PHF21AQ96BD5 680 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 TECPR2O15040 1411 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 E9PBE3 544 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 KLHL41O60662 606 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 CNTFP26441 200 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 THPOP40225 353 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 ZCWPW2Q504Y3 356 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 ABRAQ8N0Z2 381 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 FAM136AQ96C01 138 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 SNX13Q9Y5W8 968 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 ST3GAL1Q11201 340 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 BBS7Q8IWZ6 715 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRKCB-201ENST00000303531 KAT2BQ92831 832 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 MYBPC2Q14324 1141 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 MCOLN2Q8IZK6 566 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 SPATA16Q9BXB7 569 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 SOX13Q9UN79 622 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 ZNF23P17027 643 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 SLC5A5Q92911 643 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 IL17RBQ9NRM6 502 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 F5H5T6 163 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 MAP3K7CLP57077 242 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 DCLK3Q9C098 648 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 FRMPD1Q5SYB0 1578 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 VPS26AO75436 327 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 NUMBP49757 651 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 RPL10AP62906 217 aaKnown RBP14.38□□□□□ -0.11
PRKCB-201ENST00000303531 SEPT8Q92599 483 aa14.38□□□□□ -0.11
PRKCB-201ENST00000303531 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.38□□□□□ -0.114e-6■□□□□ 9.9
PRKCB-201ENST00000303531 ZCCHC18P0CG32 403 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 ARHGEF19Q8IW93 802 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 FICDQ9BVA6 458 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 YIPF2Q9BWQ6 316 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 DCLRE1BQ9H816 532 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 RXFP1Q9HBX9 757 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 PNMA8BQ9ULN7 279 aaPredicted RBP14.37□□□□□ -0.11
PRKCB-201ENST00000303531 PIK3C2BO00750 1634 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 HPCAP84074 193 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 DDX39BQ13838 428 aaKnown RBP14.37□□□□□ -0.11
PRKCB-201ENST00000303531 C11orf96Q7Z7L8 435 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 PNMA5Q96PV4 448 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 PCDH9Q9HC56 1237 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 DDX20Q9UHI6 824 aaKnown RBP14.37□□□□□ -0.11
PRKCB-201ENST00000303531 A0A087X0B3 334 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 CXCL8P10145 99 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 GYS1P13807 737 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 CPA3P15088 417 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 C1QBPQ07021 282 aaKnown RBP14.37□□□□□ -0.11
PRKCB-201ENST00000303531 OTOAQ7RTW8 1153 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 FBXL16Q8N461 479 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 CYP2F1P24903 491 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 ILDR1Q86SU0 546 aaPredicted RBP14.37□□□□□ -0.11
PRKCB-201ENST00000303531 TDRD5Q8NAT2 981 aaKnown RBP14.37□□□□□ -0.11
PRKCB-201ENST00000303531 SYTL5Q8TDW5 730 aaPredicted RBP14.37□□□□□ -0.11
PRKCB-201ENST00000303531 HDAC7Q8WUI4 952 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 JCHAINP01591 159 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 HIST2H2ACQ16777 129 aaPredicted RBP14.37□□□□□ -0.11
PRKCB-201ENST00000303531 PDPK2PQ6A1A2 396 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 HIST2H2AA3Q6FI13 130 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 SAMD3Q8N6K7 520 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 DIS3LQ8TF46 1054 aaKnown RBP14.37□□□□□ -0.11
PRKCB-201ENST00000303531 CYTH3O43739 400 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 DEFA1P59665 94 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 DEFA3P59666 94 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 IYDQ6PHW0 289 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 FBXO32Q969P5 355 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 ELMO3Q96BJ8 720 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 NMRK2Q9NPI5 230 aa14.37□□□□□ -0.11
PRKCB-201ENST00000303531 PLEKHM3Q6ZWE6 761 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 TMC3Q7Z5M5 1100 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 C11orf74Q86VG3 221 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 COLGALT1Q8NBJ5 622 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 DUSP9Q99956 384 aaKnown RBP14.36□□□□□ -0.11
PRKCB-201ENST00000303531 CYP3A43Q9HB55 503 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 SPON1Q9HCB6 807 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 SEPT3Q9UH03 358 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 GRK2P25098 689 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 PTPN4P29074 926 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 RPL21P46778 160 aaKnown RBP14.36□□□□□ -0.11
PRKCB-201ENST00000303531 MPP3Q13368 585 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 CYP2W1Q8TAV3 490 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 PDCD2LQ9BRP1 358 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 ACOT9Q9Y305 439 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 ADAMTS13Q76LX8 1427 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 FAM153BP0C7A2 387 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 PSMC3P17980 439 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 PRIM2P49643 509 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 LAMTOR4Q0VGL1 99 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 TBX2Q13207 712 aaPredicted RBP14.36□□□□□ -0.11
PRKCB-201ENST00000303531 R3HDM1Q15032 1099 aaKnown RBP14.36□□□□□ -0.11
PRKCB-201ENST00000303531 FAM153CQ494X1 144 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 SLC30A10Q6XR72 485 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 FAM153AQ9UHL3 310 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 ASS1P00966 412 aaKnown RBP14.36□□□□□ -0.11
PRKCB-201ENST00000303531 UBP1Q9NZI7 540 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 GPR182O15218 404 aa14.36□□□□□ -0.11
PRKCB-201ENST00000303531 GIMAP4Q9NUV9 329 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms