RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 RPL19P84098 196 aaKnown RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 TRIM32Q13049 653 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CAMK1Q14012 370 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CHRNA2Q15822 529 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 LONP2Q86WA8 852 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CREG2Q8IUH2 290 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PTCD3Q96EY7 689 aaKnown RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 UGT2B28Q9BY64 529 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ACSS3Q9H6R3 686 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 RAPGEFL1Q9UHV5 662 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CARD8Q9Y2G2 431 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 SPDYE5A6NIY4 337 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 FAM189A1O60320 539 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 STX11O75558 287 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ANXA9O76027 345 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CSPG5O95196 566 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ALBP02768 609 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PSMC5P62195 406 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PSMC6P62333 389 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PSMD5Q16401 504 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 SPDYE7PQ495Y7 208 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 UGT3A1Q6NUS8 523 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PIWIL4Q7Z3Z4 852 aaKnown RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 MDM1Q8TC05 714 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 RAB2BQ8WUD1 216 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 DEPDC1BQ8WUY9 529 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 MAML1Q92585 1016 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 HPS1Q92902 700 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 BIRC8Q96P09 236 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 AP5M1Q9H0R1 490 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 UNC45AQ9H3U1 944 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ARMT1Q9H993 441 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 NEU2Q9Y3R4 380 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ISPDA4D126 451 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CHADO15335 359 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 DFNA5O60443 496 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 MPZL2O60487 215 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CCT8P50990 548 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 MESDQ14696 234 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 SV2CQ496J9 727 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 HABP4Q5JVS0 413 aaKnown RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 NFRKBQ6P4R8 1299 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PEG10Q86TG7 708 aaKnown RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 LRRC34Q8IZ02 419 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 LZTR1Q8N653 840 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PACSIN1Q9BY11 444 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 RETREG1Q9H6L5 497 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 HBS1LQ9Y450 684 aaKnown RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ECE2O60344 883 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CAMTA2O94983 1202 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 RPSAP08865 295 aaKnown RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PIK3CAP42336 1068 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PTPN9P43378 593 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 SESN2P58004 480 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 BNIP1Q12981 228 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 THEMIS2Q5TEJ8 643 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ARHGAP17Q68EM7 881 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 HEATR6Q6AI08 1181 aaKnown RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ARMC6Q6NXE6 501 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 TTC33Q6PID6 262 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CCDC149Q6ZUS6 474 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CATSPER3Q86XQ3 398 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 TBCKQ8TEA7 893 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PDCD6IPQ8WUM4 868 aaKnown RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CDCA5Q96FF9 252 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 FAM129BQ96TA1 746 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 INTS2Q9H0H0 1204 aaKnown RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 SEC31BQ9NQW1 1179 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ATPIF1Q9UII2 106 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 KCNJ14Q9UNX9 436 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 NPHP4O75161 1426 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 A0A0G2JND7 137 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 H7C0C1 242 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PSMG1O95456 288 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CYP1A2P05177 515 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CHRM1P11229 460 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 CCNB1P14635 433 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ATP5OP48047 213 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 TRAP1Q12931 704 aaKnown RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ZNF846Q147U1 533 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 NKX1-1Q15270 411 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 TRIP13Q15645 432 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 HYIQ5T013 277 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 FAM45BPQ6NSW5 357 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ZNF589Q86UQ0 364 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.41□□□□□ -1.54
SCN1A-201ENST00000303395 MED15Q96RN5 788 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 MRIQ9BWK5 157 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 COA1Q9GZY4 146 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 TRHDEQ9UKU6 1024 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PCDHB6Q9Y5E3 794 aa5.41□□□□□ -1.54
SCN1A-201ENST00000303395 PEPDP12955 493 aa5.4□□□□□ -1.54
SCN1A-201ENST00000303395 NFKB1P19838 968 aa5.4□□□□□ -1.54
SCN1A-201ENST00000303395 CES1P23141 567 aa5.4□□□□□ -1.54
SCN1A-201ENST00000303395 BCAR1P56945 870 aa5.4□□□□□ -1.54
SCN1A-201ENST00000303395 FKBP1AP62942 108 aaKnown RBP5.4□□□□□ -1.54
SCN1A-201ENST00000303395 FOXM1Q08050 763 aa5.4□□□□□ -1.54
SCN1A-201ENST00000303395 SUZ12Q15022 739 aaKnown RBP5.4□□□□□ -1.54
SCN1A-201ENST00000303395 ZNF667Q5HYK9 610 aa5.4□□□□□ -1.54
SCN1A-201ENST00000303395 PLD3Q8IV08 490 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms