RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 TMX2Q9Y320 296 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TRPV2Q9Y5S1 764 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 GLI2P10070 1586 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 IFRD1O00458 451 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 PYGBP11216 843 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 PRIM2P49643 509 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 FLT3LGP49771 235 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 STX3Q13277 289 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 PDK1Q15118 436 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 GPR142Q7Z601 462 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 ITIH5Q86UX2 942 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TRAPPC5Q8IUR0 188 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 PSD3Q9NYI0 1048 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 NCAPD2Q15021 1401 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 PSMD3O43242 534 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 USP12O75317 370 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 IFNA16P05015 189 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 POLR2EP19388 210 aaKnown RBP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TGM2P21980 687 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 YWHAQP27348 245 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 XRCC4Q13426 336 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 CHADLQ6NUI6 762 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 GATAD2AQ86YP4 633 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TAS1R2Q8TE23 839 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 SLC20A1Q8WUM9 679 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 C7orf25Q9BPX7 421 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 PLA2G12BQ9BX93 195 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 LZTS1Q9Y250 596 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 MEI4A8MW99 385 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 CTPS1P17812 591 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 CYP11B2P19099 503 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 RPL10AP62906 217 aaKnown RBP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TRIM60Q495X7 471 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 MTHFD1LQ6UB35 978 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 SUSD6Q92537 303 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TUBGCP3Q96CW5 907 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TAF1DQ9H5J8 278 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 CAAP1Q9H8G2 361 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 RBM22Q9NW64 420 aaKnown RBP eCLIP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 GAS2O43903 313 aaKnown RBP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 ARHGEF19Q8IW93 802 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 MED4Q9NPJ6 270 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 AK9Q5TCS8 1911 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 ASTN2O75129 1339 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 CCDC188H7C350 402 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 VCLP18206 1134 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 PTPRAP18433 802 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 PNPLA4P41247 253 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 NAMPTP43490 491 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 SERPINB4P48594 390 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 CCDC15Q0P6D6 951 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 FBXL19Q6PCT2 694 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 CFAP52Q8N1V2 620 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 REPS2Q8NFH8 660 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 GFM2Q969S9 779 aaKnown RBP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 ABCG4Q9H172 646 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 RRP15Q9Y3B9 282 aaKnown RBP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 ALG6Q9Y672 507 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TMEM88BA6NKF7 163 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 FMO4P31512 558 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 MIIPQ5JXC2 388 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 FBXO47Q5MNV8 452 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 C11orf63Q6NUN7 778 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 FAR2Q96K12 515 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 RIT2Q99578 217 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 CISHQ9NSE2 258 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 CDYLQ9Y232 598 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 CRYL1Q9Y2S2 319 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 ANKRD63C9JTQ0 380 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 KRT20P35900 424 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 PPP2R2AP63151 447 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 PLOD1Q02809 727 aaPredicted RBP8.05□□□□□ -1.12
SCN9A-201ENST00000303354 TARBP2Q15633 366 aaKnown RBP8.05□□□□□ -1.12
SCN9A-201ENST00000303354 INSCQ1MX18 579 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 PCNX4Q63HM2 1172 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 POMZP3Q6PJE2 187 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 ILDR2Q71H61 639 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 SGMS1Q86VZ5 419 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 NRSN1Q8IZ57 195 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 COLGALT1Q8NBJ5 622 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 ZNF556Q9HAH1 456 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 GTF3C4Q9UKN8 822 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 ADGRG1Q9Y653 693 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 DUSP10Q9Y6W6 482 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 ATP6V1C1P21283 382 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 MAP2K2P36507 400 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 BRCC3P46736 316 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 ISLR2Q6UXK2 745 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 SPATA20Q8TB22 786 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 MDM1Q8TC05 714 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 SLC2A14Q8TDB8 520 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 TSPAN16Q9UKR8 245 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 MED14O60244 1454 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 CHURC1-FNTBB4DL54 471 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 RAD51CO43502 376 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 CHN1P15882 459 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 C21orf59P57076 290 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 METTL7BQ6UX53 244 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 KLK6Q92876 244 aa8.05□□□□□ -1.12
SCN9A-201ENST00000303354 LRRC37BQ96QE4 947 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms