RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 EIF2B2P49770 351 aaKnown RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 STARD3Q14849 445 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 SNRNP35Q16560 246 aaKnown RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 FBXO42Q6P3S6 717 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 TRAPPC11Q7Z392 1133 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 LDHDQ86WU2 507 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 PROSER1Q86XN7 944 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 TBC1D10CQ8IV04 446 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 SVOPQ8N4V2 548 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 SLC44A5Q8NCS7 719 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 PPP1R10Q96QC0 940 aaKnown RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 KCTD14Q9BQ13 255 aaPredicted RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 OXCT2Q9BYC2 517 aaPredicted RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 FRMD8Q9BZ67 464 aaPredicted RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 ABI2Q9NYB9 513 aaPredicted RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 BCL10O95999 233 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 ALOX12P18054 663 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 WARSP23381 471 aaKnown RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 SERPINB8P50452 374 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 KPNA1P52294 538 aaPredicted RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 RBBP4Q09028 425 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 CYP4A22Q5TCH4 519 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 ZBTB49Q6ZSB9 765 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 NMD3Q96D46 503 aaKnown RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 RSPH9Q9H1X1 276 aaPredicted RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 TRIT1Q9H3H1 467 aaKnown RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 COMMD8Q9NX08 183 aa10.71□□□□□ -0.7
CLIP1-201ENST00000302528 CHORDC1Q9UHD1 332 aaPredicted RBP10.71□□□□□ -0.7
CLIP1-201ENST00000302528 F5H5T6 163 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 STX11O75558 287 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 CLPTM1O96005 669 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 MAPK9P45984 424 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 LGALS3BPQ08380 585 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 SEMA3FQ13275 785 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 SEPT1Q8WYJ6 367 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 KAT2BQ92831 832 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 CYP4F12Q9HCS2 524 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 AAASQ9NRG9 546 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 RPS6KL1Q9Y6S9 549 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 EFCAB6Q5THR3 1501 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 MYL12BO14950 172 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 GH1P01241 217 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 STAT5AP42229 794 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 FMO5P49326 533 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 AP1S2P56377 157 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 SRP54P61011 504 aaKnown RBP10.7□□□□□ -0.7
CLIP1-201ENST00000302528 LPIN1Q14693 890 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 TOMM20Q15388 145 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 GPAT2Q6NUI2 795 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 UBE2OQ9C0C9 1292 aaKnown RBP10.7□□□□□ -0.7
CLIP1-201ENST00000302528 PIF1Q9H611 641 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 NOD2Q9HC29 1040 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 HEY2Q9UBP5 337 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 E9PCH4 1651 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 SMIM22K7EJ46 135 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 IFRD1O00458 451 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-201ENST00000302528 MAGEB2O15479 319 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 ABCB1P08183 1280 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-201ENST00000302528 FGRP09769 529 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 TSPAN19P0C672 248 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 PRDX5P30044 214 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 MCAMP43121 646 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 CRYMQ14894 314 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 TAF1CQ15572 869 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-201ENST00000302528 BARGINQ6ZT62 677 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 FAM20CQ8IXL6 584 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 KCNB2Q92953 911 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 WDCPQ9H6R7 721 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 COMMD9Q9P000 198 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 COPG2Q9UBF2 871 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 C1orf232A0A0U1RR37 186 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 BCLAF3A2AJT9 711 aaKnown RBP10.7□□□□□ -0.7
CLIP1-201ENST00000302528 H3BN98 237 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 ACADMP11310 421 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 COMTP21964 271 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 RCVRNP35243 200 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 HMGCS2P54868 508 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 R3HCC1LQ7Z5L2 792 aaKnown RBP10.7□□□□□ -0.7
CLIP1-201ENST00000302528 SCUBE1Q8IWY4 988 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 FMR1NBQ8N0W7 255 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-201ENST00000302528 FAM136AQ96C01 138 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 SPACA7Q96KW9 195 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 TINF2Q9BSI4 451 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 NLNQ9BYT8 704 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 PCDHGA3Q9Y5H0 932 aa10.7□□□□□ -0.7
CLIP1-201ENST00000302528 ZCCHC11Q5TAX3 1644 aaKnown RBP10.7□□□□□ -0.7
CLIP1-201ENST00000302528 KPNA4O00629 521 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-201ENST00000302528 OR6B1O95007 311 aa10.69□□□□□ -0.7
CLIP1-201ENST00000302528 GLRBP48167 497 aa10.69□□□□□ -0.7
CLIP1-201ENST00000302528 CYP24A1Q07973 514 aa10.69□□□□□ -0.7
CLIP1-201ENST00000302528 SUSD4Q5VX71 490 aa10.69□□□□□ -0.7
CLIP1-201ENST00000302528 SEL1L3Q68CR1 1132 aa10.69□□□□□ -0.7
CLIP1-201ENST00000302528 DENND5BQ6ZUT9 1274 aa10.69□□□□□ -0.7
CLIP1-201ENST00000302528 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLIP1-201ENST00000302528 AHSPQ9NZD4 102 aa10.69□□□□□ -0.7
CLIP1-201ENST00000302528 PRKAG3Q9UGI9 489 aa10.69□□□□□ -0.7
CLIP1-201ENST00000302528 NDOR1Q9UHB4 597 aa10.69□□□□□ -0.7
CLIP1-201ENST00000302528 AAR2Q9Y312 384 aaKnown RBP10.69□□□□□ -0.7
CLIP1-201ENST00000302528 ABCA6Q8N139 1617 aa10.69□□□□□ -0.7
CLIP1-201ENST00000302528 BAIAP3O94812 1187 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms