RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 NCAPGQ9BPX3 1015 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 PARD6BQ9BYG5 372 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 OSBPL8Q9BZF1 889 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 STAP1Q9ULZ2 295 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 CDY1Q9Y6F8 540 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 MTMR11A4FU01 709 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 C2CD2LO14523 706 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 CAPN9O14815 690 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 TRIM66O15016 1216 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 GJB5O95377 273 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 SOD2P04179 222 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 NOS2P35228 1153 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 MAGEA11P43364 429 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 HDAC4P56524 1084 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 TMEM240Q5SV17 173 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 MFSD7Q6UXD7 560 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 SPOCD1Q6ZMY3 1216 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 MAIP1Q8WWC4 291 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 PIK3R5Q8WYR1 880 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 IRGQQ8WZA9 623 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 PNKPQ96T60 521 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 TBCBQ99426 244 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 ZBED2Q9BTP6 218 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 C11orf84Q9BUA3 381 aaPredicted RBP13.58□□□□□ -0.24
CCDC7-202ENST00000302316 HEMGNQ9BXL5 484 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 SPG21Q9NZD8 308 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 CXXC1Q9P0U4 656 aaPredicted RBP13.58□□□□□ -0.24
CCDC7-202ENST00000302316 MTRRQ9UBK8 725 aa13.58□□□□□ -0.24
CCDC7-202ENST00000302316 TARSL2A2RTX5 802 aaKnown RBP13.57□□□□□ -0.24
CCDC7-202ENST00000302316 FSCN2O14926 492 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 LTFP02788 710 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 RARAP10276 462 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 SLC25A52Q3SY17 297 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 GLE1Q53GS7 698 aaKnown RBP13.57□□□□□ -0.24
CCDC7-202ENST00000302316 RNF19BQ6ZMZ0 732 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 FBXO22Q8NEZ5 403 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 SCAMP5Q8TAC9 235 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 CENPIQ92674 756 aaPredicted RBP13.57□□□□□ -0.24
CCDC7-202ENST00000302316 HERPUD2Q9BSE4 406 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 HERC2P3Q9BVR0 1158 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 CHST7Q9NS84 486 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC7-202ENST00000302316 USP3Q9Y6I4 520 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 TNFRSF10BO14763 440 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 PHF2O75151 1096 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 RPL17P18621 184 aaKnown RBP13.57□□□□□ -0.24
CCDC7-202ENST00000302316 GPR15P49685 360 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 COPS2P61201 443 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 SLC7A5Q01650 507 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 SMARCB1Q12824 385 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 SIX1Q15475 284 aaPredicted RBP13.57□□□□□ -0.24
CCDC7-202ENST00000302316 PPP2R5EQ16537 467 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 DDR2Q16832 855 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 SDHAF4Q5VUM1 108 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 SYPL2Q5VXT5 272 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 KAZNQ674X7 775 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 PM20D1Q6GTS8 502 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 STRADAQ7RTN6 431 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 BHLHA9Q7RTU4 235 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 ANKS1BQ7Z6G8 1248 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 ZDHHC14Q8IZN3 488 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 SCML4Q8N228 414 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 TTC9BQ8N6N2 239 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 PRELID2Q8N945 189 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 KCTD6Q8NC69 237 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 C8orf48Q96LL4 319 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 SEPT5Q99719 369 aaPredicted RBP13.57□□□□□ -0.24
CCDC7-202ENST00000302316 HTATIP2Q9BUP3 242 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 ADAM33Q9BZ11 813 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 SLITRK6Q9H5Y7 841 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 AAASQ9NRG9 546 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 ZMYND8Q9ULU4 1186 aaPredicted RBP13.57□□□□□ -0.24
CCDC7-202ENST00000302316 NAALADL1Q9UQQ1 740 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 BACE2Q9Y5Z0 518 aa13.57□□□□□ -0.24
CCDC7-202ENST00000302316 RAD51CO43502 376 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 NCAM1P13591 858 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 KRT10P13645 584 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 PPM1AP35813 382 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 CDKN2BP42772 138 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 GLUD2P49448 558 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 ATXN1P54253 815 aaKnown RBP13.56□□□□□ -0.24
CCDC7-202ENST00000302316 HTRA4P83105 476 aaPredicted RBP13.56□□□□□ -0.24
CCDC7-202ENST00000302316 ROR1Q01973 937 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 MGAT5BQ3V5L5 792 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 TFDP3Q5H9I0 405 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 SLC8B1Q6J4K2 584 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 CYP4V2Q6ZWL3 525 aaPredicted RBP13.56□□□□□ -0.24
CCDC7-202ENST00000302316 FIBCD1Q8N539 461 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 STKLD1Q8NE28 680 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 C2orf15Q8WU43 125 aaKnown RBP13.56□□□□□ -0.24
CCDC7-202ENST00000302316 HDAC7Q8WUI4 952 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 PLEKHA4Q9H4M7 779 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 AMACRQ9UHK6 382 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 PCDHB12Q9Y5F1 795 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 KIAA1671Q9BY89 1806 aa13.56□□□□□ -0.24
CCDC7-202ENST00000302316 hCG_1818297A0A087WSY0 165 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 SYNJ2BP-COX16A0A087WUM0 186 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 WDR27A2RRH5 827 aa13.55□□□□□ -0.24
CCDC7-202ENST00000302316 M0QYT0 321 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms