RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ZNF252P-AS1Q0IIN9 211 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 EIF4EBP2Q13542 120 aaPredicted RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 SLC5A9Q2M3M2 681 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 PRSS36Q5K4E3 855 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 C10orf76Q5T2E6 689 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 LIN9Q5TKA1 542 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 H2AFVQ71UI9 128 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 SLC26A9Q7LBE3 791 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 BNIPLQ7Z465 357 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 VPS36Q86VN1 386 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 REXO1L1PQ8IX06 675 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 C3orf20Q8ND61 904 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 CASP10Q92851 521 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 PABPC5Q96DU9 382 aaKnown RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 LRRC4Q9HBW1 653 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 AVENQ9NQS1 362 aaPredicted RBP9.97□□□□□ -0.81
RFX3-201ENST00000302303 GMIPQ9P107 970 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 CALCOCO1Q9P1Z2 691 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 TRIM10Q9UDY6 481 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 INTUQ9ULD6 942 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 ASB3Q9Y575 518 aa9.97□□□□□ -0.81
RFX3-201ENST00000302303 A0A1W2PQH9 124 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 ZNF840PA6NDX5 716 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 TMEM191CA6NGB0 347 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 SIGLEC16A6NMB1 481 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 USP27XA6NNY8 438 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 RTN3O95197 1032 aaPredicted RBP9.96□□□□□ -0.82
RFX3-201ENST00000302303 LRG1P02750 347 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 CALB1P05937 261 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 TFE3P19532 575 aaPredicted RBP9.96□□□□□ -0.82
RFX3-201ENST00000302303 FLT3P36888 993 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 SCNN1AP37088 669 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 VAV2P52735 878 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 GPC5P78333 572 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 PITX1P78337 314 aaPredicted RBP9.96□□□□□ -0.82
RFX3-201ENST00000302303 RAB6CQ53S08 254 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 OTUD1Q5VV17 481 aaPredicted RBP9.96□□□□□ -0.82
RFX3-201ENST00000302303 SYPL2Q5VXT5 272 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 BSPRYQ5W0U4 402 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 OR6B2Q6IFH4 312 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 TMC5Q6UXY8 1006 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 ZNF662Q6ZS27 426 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 ARCQ7LC44 396 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 GPR149Q86SP6 731 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 MON1AQ86VX9 555 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 ZDHHC17Q8IUH5 632 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 ARFGAP1Q8N6T3 406 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 IRGQQ8WZA9 623 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 NT5C3BQ969T7 300 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 TCEAL4Q96EI5 215 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 NOX5Q96PH1 765 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 SLC2A13Q96QE2 648 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 GAS2L1Q99501 681 aaPredicted RBP9.96□□□□□ -0.82
RFX3-201ENST00000302303 RAB6CQ9H0N0 254 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 FBXO44Q9H4M3 255 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 OSGEPQ9NPF4 335 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 CNOT8Q9UFF9 292 aaKnown RBP9.96□□□□□ -0.82
RFX3-201ENST00000302303 MAGED2Q9UNF1 606 aaPredicted RBP9.96□□□□□ -0.82
RFX3-201ENST00000302303 PPP2R2CQ9Y2T4 447 aa9.96□□□□□ -0.82
RFX3-201ENST00000302303 C2CD4BA6NLJ0 364 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 GRAP2O75791 330 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 MTA2O94776 668 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 FBXO21O94952 628 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 RHOP08100 348 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 GJA1P17302 382 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 PTPN2P17706 415 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 ZXDBP98169 803 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 IFRD2Q12894 506 aaPredicted RBP9.95□□□□□ -0.82
RFX3-201ENST00000302303 PLD1Q13393 1074 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 BEND5Q7L4P6 421 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 GRASPQ7Z6J2 395 aaPredicted RBP9.95□□□□□ -0.82
RFX3-201ENST00000302303 CPNE8Q86YQ8 564 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 ZNF276Q8N554 614 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 EMC1Q8N766 993 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 SLC35G2Q8TBE7 412 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 KIAA1524Q8TCG1 905 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 FBXO32Q969P5 355 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 PPP2R3CQ969Q6 453 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 ZNF653Q96CK0 615 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 ZNF512Q96ME7 567 aaPredicted RBP9.95□□□□□ -0.82
RFX3-201ENST00000302303 SLC22A12Q96S37 553 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 CORO1BQ9BR76 489 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 APOL5Q9BWW9 433 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 RNF38Q9H0F5 515 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 SFXN1Q9H9B4 322 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 METTL5Q9NRN9 209 aaKnown RBP9.95□□□□□ -0.82
RFX3-201ENST00000302303 KCND1Q9NSA2 647 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 DZANK1Q9NVP4 752 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.95□□□□□ -0.82
RFX3-201ENST00000302303 ASNSD1Q9NWL6 643 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 WDR35Q9P2L0 1181 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 MYO1AQ9UBC5 1043 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 NAALADL1Q9UQQ1 740 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 C2orf16Q68DN1 1984 aa9.95□□□□□ -0.82
RFX3-201ENST00000302303 C2orf78A6NCI8 922 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 BTNL10A8MVZ5 291 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 GOLGA8SH3BPF8 625 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 OLFM2O95897 454 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 TBX18O95935 607 aa9.94□□□□□ -0.82
RFX3-201ENST00000302303 IGLV3-25P01717 112 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms