RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TBCBQ99426 244 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 SNRNP25Q9BV90 132 aaKnown RBP23.29■■□□□ 1.32
SMAD1-201ENST00000302085 RHOBTB2Q9BYZ6 727 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 FAM129AQ9BZQ8 928 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 TBC1D13Q9NVG8 400 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 TMLHEQ9NVH6 421 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 VPS18Q9P253 973 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 NFS1Q9Y697 457 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 OPA1O60313 960 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 DESP17661 470 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 IL4RP24394 825 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 VPS41P49754 854 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 OTUD4Q01804 1114 aaKnown RBP23.28■■□□□ 1.32
SMAD1-201ENST00000302085 MTMR3Q13615 1198 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 CA9Q16790 459 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 OVOS1Q6IE37 1185 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 RHBDF2Q6PJF5 856 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 LRRTM3Q86VH5 581 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 GLIS1Q8NBF1 620 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 TTC13Q8NBP0 860 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 OR10T2Q8NGX3 314 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 URGCPQ8TCY9 931 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 UBLCP1Q8WVY7 318 aaPredicted RBP23.28■■□□□ 1.32
SMAD1-201ENST00000302085 MYLPFQ96A32 169 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 TMEM209Q96SK2 561 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 RNF208Q9H0X6 261 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 TMEM161AQ9NX61 479 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 CALCOCO1Q9P1Z2 691 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 MTRF1LQ9UGC7 380 aaKnown RBP23.28■■□□□ 1.32
SMAD1-201ENST00000302085 TSC2P49815 1807 aa23.28■■□□□ 1.32
SMAD1-201ENST00000302085 HHLA1C9JL84 531 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 COL6A1P12109 1028 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 ATF2P15336 505 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 YWHAZP63104 245 aaKnown RBP23.27■■□□□ 1.32
SMAD1-201ENST00000302085 PDK2Q15119 407 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 TCTN1Q2MV58 587 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 GPRIN1Q7Z2K8 1008 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 SIX6OS1Q8N1H7 587 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 CCDC89Q8N998 374 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 RUFY1Q96T51 708 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 PCDHB8Q9UN66 801 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 NRP1O14786 923 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 DAB1O75553 588 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 ITGAVP06756 1048 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 TYMPP19971 482 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 ITGA8P53708 1063 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 KRT81Q14533 505 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 RAB41Q5JT25 222 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 LRIG3Q6UXM1 1119 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 FAM149B1Q96BN6 582 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 SMARCD1Q96GM5 515 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 FRMD8P1Q9BZ68 369 aaPredicted RBP23.27■■□□□ 1.32
SMAD1-201ENST00000302085 ULBP1Q9BZM6 244 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 PCDH18Q9HCL0 1135 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 KANSL3Q9P2N6 904 aa23.27■■□□□ 1.32
SMAD1-201ENST00000302085 MDM4O15151 490 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 ZSCAN5DPP0CG00 497 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 ETS1P14921 441 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 SLC25A52Q3SY17 297 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 ERMARDQ5T6L9 678 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 HFE2Q6ZVN8 426 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 MAP7D3Q8IWC1 876 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 ARL8AQ96BM9 186 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 RNF157Q96PX1 679 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 TMEM121Q9BTD3 319 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 MAK16Q9BXY0 300 aaKnown RBP23.26■■□□□ 1.31
SMAD1-201ENST00000302085 EPB41L4BQ9H329 900 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 CSNK1G1Q9HCP0 422 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 DNAJB4Q9UDY4 337 aa23.26■■□□□ 1.31
SMAD1-201ENST00000302085 APOC4-APOC2K7ER74 178 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 PITPNM1O00562 1244 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 PQBP1O60828 265 aaKnown RBP23.25■■□□□ 1.31
SMAD1-201ENST00000302085 FBXO21O94952 628 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 APOC2P02655 101 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 PECAM1P16284 738 aaPredicted RBP23.25■■□□□ 1.31
SMAD1-201ENST00000302085 PMS2P54278 862 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 GABPB1Q06547 395 aaPredicted RBP23.25■■□□□ 1.31
SMAD1-201ENST00000302085 SPDYCQ5MJ68 293 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 STRADAQ7RTN6 431 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 THEM5Q8N1Q8 247 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 OR2W6PQ8NHA6 318 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 SLC2A13Q96QE2 648 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 MAGEB5Q9BZ81 275 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 ELAC1Q9H777 363 aaKnown RBP23.25■■□□□ 1.31
SMAD1-201ENST00000302085 C10orf88Q9H8K7 445 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 ANAPC5Q9UJX4 755 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 PITX1P78337 314 aaPredicted RBP23.25■■□□□ 1.31
SMAD1-201ENST00000302085 RNASELQ05823 741 aaKnown RBP23.25■■□□□ 1.31
SMAD1-201ENST00000302085 DCAF6Q58WW2 860 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 OTUD1Q5VV17 481 aaPredicted RBP23.25■■□□□ 1.31
SMAD1-201ENST00000302085 NT5C3BQ969T7 300 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 BEGAINQ9BUH8 593 aa23.25■■□□□ 1.31
SMAD1-201ENST00000302085 ARHGEF37A1IGU5 675 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 TMEM189-UBE2V1I3L0A0 370 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 FYNP06241 537 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 BDNFP23560 247 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 L1CAMP32004 1257 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 NOS2P35228 1153 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 OR1G1P47890 313 aa23.24■■□□□ 1.31
SMAD1-201ENST00000302085 DAOAP59103 153 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms