RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 TRIM72Q6ZMU5 477 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 PHF13Q86YI8 300 aaPredicted RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 TMEM35BQ8NCS4 154 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 AZIN2Q96A70 460 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 ATXN7L3BQ96GX2 97 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 ZNF668Q96K58 619 aaPredicted RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 C8orf37Q96NL8 207 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 TARS2Q9BW92 718 aaKnown RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 MIS12Q9H081 205 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 PCDHGB4Q9UN71 923 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 PCDHGB5Q9Y5G0 923 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 KCNN4O15554 427 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 DHX15O43143 795 aaKnown RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 GRAP2O75791 330 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 KRT3P12035 628 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 ACO1P21399 889 aaKnown RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 MMP8P22894 467 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 TPP2P29144 1249 aaPredicted RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 STIP1P31948 543 aaKnown RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 CHN2P52757 468 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 PSMC1P62191 440 aaKnown RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 HADHQ16836 314 aaKnown RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 SWSAP1Q6NVH7 229 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 LARGE2Q8N3Y3 721 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 LENG1Q96BZ8 264 aaPredicted RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 PRPF18Q99633 342 aaKnown RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 POLR3FQ9H1D9 316 aaPredicted RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 PLLPQ9Y342 182 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 MAGEB3O15480 346 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 CCNE2O96020 404 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 F7P08709 466 aaPredicted RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 MAPTP10636 758 aaKnown RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 ROR1Q01973 937 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 GK3PQ14409 553 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 CNGA3Q16281 694 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 ZACNQ401N2 412 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 LGSNQ5TDP6 509 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 FBXL19Q6PCT2 694 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 TRMT10BQ6PF06 316 aaKnown RBP15.23■□□□□ 0.03
COL6A2-201ENST00000300527 MSTO1Q9BUK6 570 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 PNPOQ9NVS9 261 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 GPATCH2LQ9NWQ4 482 aa15.23■□□□□ 0.03
COL6A2-201ENST00000300527 AIM2O14862 343 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 CALB1P05937 261 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 DHRS4L1P0CG22 281 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 FASTKD1Q53R41 847 aaKnown RBP15.22■□□□□ 0.03
COL6A2-201ENST00000300527 KLHL23Q8NBE8 558 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 IL1RAPL1Q9NZN1 696 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 PHF24Q9UPV7 400 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 ZNF711Q9Y462 761 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 TAF1LQ8IZX4 1826 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 ZNF541Q9H0D2 1346 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 E9PBE3 544 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 PLSCR1O15162 318 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 DCXO43602 365 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 PEX1O43933 1283 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 KLHL41O60662 606 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 ASLP04424 464 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 CDH6P55285 790 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 MRPS5P82675 430 aaKnown RBP15.22■□□□□ 0.03
COL6A2-201ENST00000300527 MRPS9P82933 396 aaKnown RBP15.22■□□□□ 0.03
COL6A2-201ENST00000300527 CCNIQ14094 377 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 TATDN1Q6P1N9 297 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 TRIM42Q8IWZ5 723 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 UNC5BQ8IZJ1 945 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 RAB3IL1Q8TBN0 382 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 DEPDC1BQ8WUY9 529 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 CCDC106Q9BWC9 280 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 DDX56Q9NY93 547 aaKnown RBP15.22■□□□□ 0.03
COL6A2-201ENST00000300527 MAGED2Q9UNF1 606 aaPredicted RBP15.22■□□□□ 0.03
COL6A2-201ENST00000300527 TCN1P20061 433 aaPredicted RBP15.22■□□□□ 0.03
COL6A2-201ENST00000300527 TBL3Q12788 808 aaKnown RBP15.22■□□□□ 0.03
COL6A2-201ENST00000300527 MAP7D3Q8IWC1 876 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 PGBD4Q96DM1 585 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 DHRS4Q9BTZ2 278 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 XPNPEP1Q9NQW7 623 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 STK32BQ9NY57 414 aa15.22■□□□□ 0.03
COL6A2-201ENST00000300527 TNRC6CQ9HCJ0 1690 aaKnown RBP15.22■□□□□ 0.03
COL6A2-201ENST00000300527 KRT19P08727 400 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 CSH1P0DML2 217 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 CSH2P0DML3 217 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 CRADDP78560 199 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 PIGHQ14442 188 aaPredicted RBP15.21■□□□□ 0.03
COL6A2-201ENST00000300527 DRICH1Q6PGQ1 229 aaPredicted RBP15.21■□□□□ 0.03
COL6A2-201ENST00000300527 FAM210AQ96ND0 272 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 LZTS1Q9Y250 596 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 NEMP1O14524 444 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 ATP6V1G1O75348 118 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 CST3P01034 146 aaPredicted RBP15.21■□□□□ 0.03
COL6A2-201ENST00000300527 KDELR1P24390 212 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 TFAMQ00059 246 aaKnown RBP15.21■□□□□ 0.03
COL6A2-201ENST00000300527 MAP3K10Q02779 954 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 SLC18A2Q05940 514 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 TMCO4Q5TGY1 634 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 ZDHHC15Q96MV8 337 aa15.21■□□□□ 0.03
COL6A2-201ENST00000300527 HEMK1Q9Y5R4 338 aaPredicted RBP15.21■□□□□ 0.03
COL6A2-201ENST00000300527 GOLGA8QA0A0J9YX86 632 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 GOLGA8OA6NCC3 632 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 GOLGA8NF8WBI6 632 aa15.2■□□□□ 0.02
COL6A2-201ENST00000300527 PABPC4LP0CB38 370 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms