RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SCN4AP35499 1836 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 LOC102724159A0A0B4J2E5 919 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 TRUB2O95900 331 aaKnown RBP9.69□□□□□ -0.86
PRDM9-201ENST00000296682 PHBP35232 272 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 CAV1Q03135 178 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 GBE1Q04446 702 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 ZNF268Q14587 947 aaPredicted RBP9.69□□□□□ -0.86
PRDM9-201ENST00000296682 PWP2Q15269 919 aaKnown RBP9.69□□□□□ -0.86
PRDM9-201ENST00000296682 MSS51Q4VC12 460 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 SPRYD7Q5W111 196 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 DEFB106AQ8N104 65 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 ALLCQ8N6M5 410 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 STKLD1Q8NE28 680 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 PEBP4Q96S96 227 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 SNRNP25Q9BV90 132 aaKnown RBP9.69□□□□□ -0.86
PRDM9-201ENST00000296682 MARCOQ9UEW3 520 aaPredicted RBP9.69□□□□□ -0.86
PRDM9-201ENST00000296682 ABLIM1O14639 778 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 IVDP26440 423 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 ABCG1P45844 678 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 PSEN2P49810 448 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 MPP2Q14168 576 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 DENND5BQ6ZUT9 1274 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 CROCCP2Q86T23 111 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 ADGRF2Q8IZF7 708 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 DNAAF3Q8N9W5 541 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 TTC13Q8NBP0 860 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 PGM2Q96G03 612 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 RSAD1Q9HA92 442 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 SPC25Q9HBM1 224 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 MFHAS1Q9Y4C4 1052 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 C17orf102A2RUQ5 167 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 SUN1O94901 812 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 NCAM1P13591 858 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 CYP3A5P20815 502 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 PITX1P78337 314 aaPredicted RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 KLF1Q13351 362 aaPredicted RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 STAT4Q14765 748 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 ERMARDQ5T6L9 678 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 MROH9Q5TGP6 573 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 LVRNQ6Q4G3 990 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 PID1Q7Z2X4 250 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 YTHDF3Q7Z739 585 aaKnown RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 PGLYRP2Q96PD5 576 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 LGMNQ99538 433 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 ABCF3Q9NUQ8 709 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 FLRT1Q9NZU1 646 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 TXNDC16Q9P2K2 825 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 ITGA11Q9UKX5 1188 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 TCRBV5S1A1TA0A578 114 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 PAPSS1O43252 624 aaPredicted RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 RPA3P35244 121 aaPredicted RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 TAF6P49848 677 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 ZNF132P52740 706 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 GSCP56915 257 aaPredicted RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 MOGSQ13724 837 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 SNX17Q15036 470 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 FSCN1Q16658 493 aaKnown RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 SOWAHAQ2M3V2 549 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 LDLRAD1Q5T700 205 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 HEATR6Q6AI08 1181 aaKnown RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 IQSEC1Q6DN90 963 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 PPP1R2P3Q6NXS1 205 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 SYDE1Q6ZW31 735 aaPredicted RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 PIGZQ86VD9 579 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 PPIL6Q8IXY8 311 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 TLCD1Q96CP7 247 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 MS4A4AQ96JQ5 239 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 SERPINB12Q96P63 405 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 KCNK16Q96T55 309 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 RHOBTB2Q9BYZ6 727 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 UBQLN1Q9UMX0 589 aaKnown RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 RRN3P2A6NIE6 340 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 KBTBD13C9JR72 458 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 SPTLC1O15269 473 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 GOT1P17174 413 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 CYP2F1P24903 491 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 SCNN1GP51170 649 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 DPYSL3Q14195 570 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 SPRED3Q2MJR0 410 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 MARCH8Q5T0T0 291 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 HACE1Q8IYU2 909 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 CENPTQ96BT3 561 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 DDX43Q9NXZ2 648 aaKnown RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 ZC3H7BQ9UGR2 993 aaKnown RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 AP4E1Q9UPM8 1137 aa9.68□□□□□ -0.86
PRDM9-201ENST00000296682 PRG3Q9Y2Y8 225 aaPredicted RBP9.68□□□□□ -0.86
PRDM9-201ENST00000296682 FAM47DPA6NHR8 397 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 ATP9BO43861 1147 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 DARSP14868 501 aaKnown RBP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 DRD4P21917 467 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 HOXA11P31270 313 aaPredicted RBP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 GRIA1P42261 906 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 ZNF143P52747 638 aaPredicted RBP9.67□□□□□ -0.86
PRDM9-201ENST00000296682 SLC6A3Q01959 620 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 CCDC14Q49A88 953 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 C9orf57Q5W0N0 161 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 PAF1Q8N7H5 531 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 ATP11CQ8NB49 1132 aa9.67□□□□□ -0.86
PRDM9-201ENST00000296682 CPT1BQ92523 772 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms