RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 SPOPLQ6IQ16 392 aa20.77■□□□□ 0.92
CXCL3-201ENST00000296026 C11orf74Q86VG3 221 aa20.77■□□□□ 0.92
CXCL3-201ENST00000296026 IL17RCQ8NAC3 791 aa20.77■□□□□ 0.92
CXCL3-201ENST00000296026 TXNDC5Q8NBS9 432 aaKnown RBP20.77■□□□□ 0.92
CXCL3-201ENST00000296026 FRMD4BQ9Y2L6 1034 aa20.77■□□□□ 0.92
CXCL3-201ENST00000296026 MYOFQ9NZM1 2061 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.76■□□□□ 0.91
CXCL3-201ENST00000296026 SGK1O00141 431 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 IKBKBO14920 756 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 ALDH1A2O94788 518 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 ASS1P00966 412 aaKnown RBP20.76■□□□□ 0.91
CXCL3-201ENST00000296026 MYL1P05976 194 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 CHRM1P11229 460 aaPredicted RBP20.76■□□□□ 0.91
CXCL3-201ENST00000296026 PIK3CAP42336 1068 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 MAP3K7CLP57077 242 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 HSF5Q4G112 596 aaPredicted RBP20.76■□□□□ 0.91
CXCL3-201ENST00000296026 C1orf220Q5T0J3 134 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 RNF43Q68DV7 783 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 UNC93AQ86WB7 457 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 BBS7Q8IWZ6 715 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 C12orf29Q8N999 325 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 WBP2Q969T9 261 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 NACA2Q9H009 215 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 CSNK1G1Q9HCP0 422 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 FAM49BQ9NUQ9 324 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 HPSEQ9Y251 543 aa20.76■□□□□ 0.91
CXCL3-201ENST00000296026 CALUO43852 315 aaPredicted RBP20.75■□□□□ 0.91
CXCL3-201ENST00000296026 HLA-DRAP01903 254 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 IRF1P10914 325 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 BCKDHBP21953 392 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 TNFRSF4P43489 277 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 KIR2DL1P43626 348 aaPredicted RBP20.75■□□□□ 0.91
CXCL3-201ENST00000296026 ASPAP45381 313 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 PGFP49763 221 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 EOGTQ5NDL2 527 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 BTBD8Q5XKL5 378 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 PHTF2Q8N3S3 785 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 NAT16Q8N8M0 369 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 CHAMP1Q96JM3 812 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 SPATA32Q96LK8 384 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 EDEM2Q9BV94 578 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 FBXO44Q9H4M3 255 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 ZDHHC4Q9NPG8 344 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.75■□□□□ 0.91
CXCL3-201ENST00000296026 TRAF3IP3Q9Y228 551 aa20.75■□□□□ 0.91
CXCL3-201ENST00000296026 TLR5O60602 858 aa20.74■□□□□ 0.91
CXCL3-201ENST00000296026 ADORA2BP29275 332 aa20.74■□□□□ 0.91
CXCL3-201ENST00000296026 VAMP7P51809 220 aa20.74■□□□□ 0.91
CXCL3-201ENST00000296026 ANO4Q32M45 955 aa20.74■□□□□ 0.91
CXCL3-201ENST00000296026 ETFBKMTQ8IXQ9 262 aa20.74■□□□□ 0.91
CXCL3-201ENST00000296026 OLIG1Q8TAK6 271 aa20.74■□□□□ 0.91
CXCL3-201ENST00000296026 DUSP9Q99956 384 aaKnown RBP20.74■□□□□ 0.91
CXCL3-201ENST00000296026 LSM14BQ9BX40 385 aaKnown RBP20.74■□□□□ 0.91
CXCL3-201ENST00000296026 POLMQ9NP87 494 aaPredicted RBP20.74■□□□□ 0.91
CXCL3-201ENST00000296026 TLR8Q9NR97 1041 aaKnown RBP20.74■□□□□ 0.91
CXCL3-201ENST00000296026 SPHK2Q9NRA0 654 aa20.74■□□□□ 0.91
CXCL3-201ENST00000296026 TBC1D3BA6NDS4 549 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 MAPK13O15264 365 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 HOXC11O43248 304 aaPredicted RBP20.73■□□□□ 0.91
CXCL3-201ENST00000296026 TULP3O75386 442 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 KIF20AO95235 890 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 PRR29P0C7W0 189 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 FAM200BP0CF97 657 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 TRIM21P19474 475 aaKnown RBP20.73■□□□□ 0.91
CXCL3-201ENST00000296026 SYKP43405 635 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 KRT85P78386 507 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 N4BP2L1Q5TBK1 243 aaPredicted RBP20.73■□□□□ 0.91
CXCL3-201ENST00000296026 CYP2U1Q7Z449 544 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 TMEM25Q86YD3 366 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 WHAMMQ8TF30 809 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 RLN3Q8WXF3 142 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 CCDC47Q96A33 483 aaKnown RBP20.73■□□□□ 0.91
CXCL3-201ENST00000296026 JAKMIP2Q96AA8 810 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 TWNKQ96RR1 684 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 IMPG2Q9BZV3 1241 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 BCCIPQ9P287 314 aaKnown RBP eCLIP20.73■□□□□ 0.91
CXCL3-201ENST00000296026 DEC1Q9P2X7 70 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 CIZ1Q9ULV3 898 aaPredicted RBP20.73■□□□□ 0.91
CXCL3-201ENST00000296026 MYH10P35580 1976 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 THADAQ6YHU6 1953 aa20.73■□□□□ 0.91
CXCL3-201ENST00000296026 ABCA7Q8IZY2 2146 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 NUP205Q92621 2012 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 ADAM23O75077 832 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 RHOBTB3O94955 611 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 TBX18O95935 607 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 NR2F2P24468 414 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 P2RY2P41231 377 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 GCLMP48507 274 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 DHPSP49366 369 aaPredicted RBP20.72■□□□□ 0.91
CXCL3-201ENST00000296026 NDUFA8P51970 172 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 INCA1Q0VD86 236 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 CLEC20AQ6ZU45 233 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 GPRIN1Q7Z2K8 1008 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 HNRNPABQ99729 332 aaKnown RBP20.72■□□□□ 0.91
CXCL3-201ENST00000296026 MAPK8IP1Q9UQF2 711 aa20.72■□□□□ 0.91
CXCL3-201ENST00000296026 LNP1A1A4G5 178 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 C4orf47A7E2U8 309 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 HHLA1C9JL84 531 aa20.71■□□□□ 0.91
CXCL3-201ENST00000296026 KHNYNO15037 678 aaKnown RBP20.71■□□□□ 0.91
CXCL3-201ENST00000296026 KCNK5O95279 499 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms