RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 EFL1Q7Z2Z2 1120 aaKnown RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 ZNF571Q7Z3V5 609 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 HIPK4Q8NE63 616 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 HAS1Q92839 578 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 FBXL21Q9UKT6 434 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 SLC39A10Q9ULF5 831 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 SYNDIG1LA6NDD5 238 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 SOAT2O75908 522 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 ZBTB17Q13105 803 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 FAM83EQ2M2I3 478 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 ERMARDQ5T6L9 678 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 TTC39BQ5VTQ0 682 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 KCNK18Q7Z418 384 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 RIBC1Q8N443 379 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 MSL3Q8N5Y2 521 aaKnown RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 LZTR1Q8N653 840 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 SLAIN1Q8ND83 568 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 MICAL2O94851 1124 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 CDH8P55286 799 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 MARC1Q5VT66 337 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 PKN3Q6P5Z2 889 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 SPOCD1Q6ZMY3 1216 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 PSD3Q9NYI0 1048 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 DRG1Q9Y295 367 aaKnown RBP18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 GTF2BQ00403 316 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 NBPF20Q3BBV1 942 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 FAXCQ5TGI0 409 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 MCOLN2Q8IZK6 566 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 OTUB1Q96FW1 271 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 SGSM3Q96HU1 749 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 EPC1Q9H2F5 836 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 MRGBPQ9NV56 204 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 FGRP09769 529 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 BDNFP23560 247 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 PPP3CCP48454 512 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 CARSP49589 748 aaKnown RBP18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 ESRRGP62508 458 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 DGKZQ13574 1117 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 ST3GAL5Q9UNP4 418 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 BAZ2BQ9UIF8 2168 aaKnown RBP18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 ZNF280AP59817 542 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 EIF2B5Q13144 721 aaKnown RBP18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 LONRF1Q17RB8 773 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 LCA5Q86VQ0 697 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 TMA16Q96EY4 203 aaKnown RBP18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 KCNF1Q9H3M0 494 aa18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 ALG13Q9NP73 1137 aaKnown RBP18.31■□□□□ 0.52
CDC42EP3-201ENST00000295324 SDR42E2A6NKP2 422 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 VPS26AO75436 327 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 SRP72O76094 671 aaKnown RBP18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 MAP3K6O95382 1288 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 PRMT2P55345 433 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 MKRN4PQ13434 485 aaPredicted RBP18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 CCNI2Q6ZMN8 369 aaPredicted RBP18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 MRPL46Q9H2W6 279 aaKnown RBP18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 LRRC40Q9H9A6 602 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 SLC9A3R1O14745 358 aaPredicted RBP18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 ELNP15502 786 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 INPP4AQ96PE3 977 aaPredicted RBP18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 ISCUQ9H1K1 167 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 NT5MQ9NPB1 228 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 SPATS2LQ9NUQ6 558 aaKnown RBP18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 SMARCAL1Q9NZC9 954 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 ANGPT2O15123 496 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 SERPINF2P08697 491 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 PTENP60484 403 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 ITGA7Q13683 1181 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 GRAMD1BQ3KR37 738 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 DSG4Q86SJ6 1040 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 ADAM33Q9BZ11 813 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 ATP13A1Q9HD20 1204 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 ADAM21Q9UKJ8 722 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 ATP9AO75110 1047 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 CD52P31358 61 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 RPL9P32969 192 aaKnown RBP18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 MMGT1Q8N4V1 131 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 FAM95CA0A1B0GW59 222 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 SCNN1BP51168 640 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 PMS1P54277 932 aaKnown RBP18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 MAPK7Q13164 816 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 PALB2Q86YC2 1186 aa18.3■□□□□ 0.52
CDC42EP3-201ENST00000295324 PTPN1P18031 435 aaKnown RBP18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 EEF1B2P24534 225 aaKnown RBP18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 OR1E1P30953 314 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 ZNF135P52742 658 aaPredicted RBP18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 CAPSQ13938 189 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 BRD8Q9H0E9 1235 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 SMYD3Q9H7B4 428 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 TBC1D13Q9NVG8 400 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 RBM22Q9NW64 420 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 GIT1Q9Y2X7 761 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 FMN2Q9NZ56 1722 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 H2AFYO75367 372 aaKnown RBP18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 LTFP02788 710 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 CYP2F1P24903 491 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 SARSP49591 514 aaKnown RBP18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 RTP1P59025 263 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 MTM1Q13496 603 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 NFIL3Q16649 462 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms