RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PREX1Q8TCU6 1659 aa17.86■□□□□ 0.45
SHANK1-201ENST00000293441 SDR42E2A6NKP2 422 aa17.86■□□□□ 0.45
SHANK1-201ENST00000293441 TRPC5OSA6NMA1 111 aa17.86■□□□□ 0.45
SHANK1-201ENST00000293441 AKR1A1P14550 325 aa17.86■□□□□ 0.45
SHANK1-201ENST00000293441 DENND1BQ6P3S1 775 aa17.86■□□□□ 0.45
SHANK1-201ENST00000293441 TMC2Q8TDI7 906 aa17.86■□□□□ 0.45
SHANK1-201ENST00000293441 ADGRE3Q9BY15 652 aa17.86■□□□□ 0.45
SHANK1-201ENST00000293441 FNTAP49354 379 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 PRIM2P49643 509 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 SLC44A2Q8IWA5 706 aaPredicted RBP17.85■□□□□ 0.45
SHANK1-201ENST00000293441 ERLEC1Q96DZ1 483 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 FRMD8P1Q9BZ68 369 aaPredicted RBP17.85■□□□□ 0.45
SHANK1-201ENST00000293441 CYP4F12Q9HCS2 524 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 KCNQ5Q9NR82 932 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 CYTH3O43739 400 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 CRTAMO95727 393 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 SEC23AQ15436 765 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 REPS2Q8NFH8 660 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 SLC20A1Q8WUM9 679 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 SOCS4Q8WXH5 440 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 FRMD8Q9BZ67 464 aaPredicted RBP17.85■□□□□ 0.45
SHANK1-201ENST00000293441 SYTL2Q9HCH5 934 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 ALDH6A1Q02252 535 aaKnown RBP17.85■□□□□ 0.45
SHANK1-201ENST00000293441 GPC2Q8N158 579 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 INPP5DQ92835 1189 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 SEC16BQ96JE7 1060 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 VPS50Q96JG6 964 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 NMRK1Q9NWW6 199 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 B2RBV5 119 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 JCHAINP01591 159 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 DARSP14868 501 aaKnown RBP17.85■□□□□ 0.45
SHANK1-201ENST00000293441 RRM1P23921 792 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 CPA2P48052 419 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 SERPINB8P50452 374 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 SKOR1P84550 965 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 CACHD1Q5VU97 1274 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 TFAP2DQ7Z6R9 452 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 TMEM121Q9BTD3 319 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 ZNF518BQ9C0D4 1074 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 CYP3A43Q9HB55 503 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 AMHP03971 560 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 ITGALP20701 1170 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 SCNN1BP51168 640 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 ACVR2BQ13705 512 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 LRRC23Q53EV4 343 aaPredicted RBP17.85■□□□□ 0.45
SHANK1-201ENST00000293441 TUBGCP3Q96CW5 907 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 DYRK1BQ9Y463 629 aa17.85■□□□□ 0.45
SHANK1-201ENST00000293441 TGFB3P10600 412 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 GPC1P35052 558 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 SLC16A1P53985 500 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 ADIGQ0VDE8 80 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 CNTN1Q12860 1018 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 TATDN2Q93075 761 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 KAZALD1Q96I82 304 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 RBBP8Q99708 897 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 CNPY3Q9BT09 278 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 THUMPD3Q9BV44 507 aaKnown RBP17.84■□□□□ 0.45
SHANK1-201ENST00000293441 UBE2OQ9C0C9 1292 aaKnown RBP17.84■□□□□ 0.45
SHANK1-201ENST00000293441 VIPAS39Q9H9C1 493 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 KIF20BQ96Q89 1820 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 APOA4P06727 396 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 RAB27AP51159 221 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 NDST1P52848 882 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 ERVK-24P63145 666 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 PGS1Q32NB8 556 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 OTOAQ7RTW8 1153 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 DIS3LQ8TF46 1054 aaKnown RBP17.84■□□□□ 0.45
SHANK1-201ENST00000293441 DPP7Q9UHL4 492 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 MAN1A2O60476 641 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 ERVK-10P10266 1014 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 PSEN2P49810 448 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 NFE2Q16621 373 aaPredicted RBP17.84■□□□□ 0.45
SHANK1-201ENST00000293441 AASDHQ4L235 1098 aaPredicted RBP17.84■□□□□ 0.45
SHANK1-201ENST00000293441 NT5DC3Q86UY8 548 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 CYP2W1Q8TAV3 490 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 ATXN3LQ9H3M9 355 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 HMX1Q9NP08 348 aaPredicted RBP17.84■□□□□ 0.45
SHANK1-201ENST00000293441 KLC4Q9NSK0 619 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 TMEM150BA6NC51 233 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 STRNO43815 780 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 FSCN1Q16658 493 aaKnown RBP17.84■□□□□ 0.45
SHANK1-201ENST00000293441 POTEAQ6S8J7 498 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 ZNF614Q8N883 585 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 KCNB2Q92953 911 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 CELF6Q96J87 481 aaKnown RBP17.84■□□□□ 0.45
SHANK1-201ENST00000293441 CDK5RAP1Q96SZ6 601 aaKnown RBP17.84■□□□□ 0.45
SHANK1-201ENST00000293441 CARD9Q9H257 536 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 SMPD4Q9NXE4 827 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 CYP2F1P24903 491 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 ADCYAP1R1P41586 468 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 NME5P56597 212 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 ERVK-9P63128 1117 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 ELAVL2Q12926 359 aaKnown RBP17.84■□□□□ 0.45
SHANK1-201ENST00000293441 PWP1Q13610 501 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 DCDC2Q9UHG0 476 aa17.84■□□□□ 0.45
SHANK1-201ENST00000293441 PLA2G6O60733 806 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 AKAP3O75969 853 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 PLD1Q13393 1074 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 BTNL9Q6UXG8 535 aa17.83■□□□□ 0.45
SHANK1-201ENST00000293441 SPOCD1Q6ZMY3 1216 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms