RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 BHLHA9Q7RTU4 235 aa28.28■■■□□ 2.12
SSU72-201ENST00000291386 TMEM110Q86TL2 294 aa28.28■■■□□ 2.12
SSU72-201ENST00000291386 NOP9Q86U38 636 aaKnown RBP28.28■■■□□ 2.12
SSU72-201ENST00000291386 FMNL3Q8IVF7 1028 aa28.28■■■□□ 2.12
SSU72-201ENST00000291386 SIX6OS1Q8N1H7 587 aa28.28■■■□□ 2.12
SSU72-201ENST00000291386 WDTC1Q8N5D0 677 aa28.28■■■□□ 2.12
SSU72-201ENST00000291386 SMG9Q9H0W8 520 aaKnown RBP28.28■■■□□ 2.12
SSU72-201ENST00000291386 OSER1Q9NX31 292 aa28.28■■■□□ 2.12
SSU72-201ENST00000291386 CYTH4Q9UIA0 394 aa28.28■■■□□ 2.12
SSU72-201ENST00000291386 NOCTQ9UK39 431 aaKnown RBP28.28■■■□□ 2.12
SSU72-201ENST00000291386 A0A1W2PQH9 124 aa28.27■■■□□ 2.12
SSU72-201ENST00000291386 CBFA2T2O43439 604 aa28.27■■■□□ 2.12
SSU72-201ENST00000291386 FBXO21O94952 628 aa28.27■■■□□ 2.12
SSU72-201ENST00000291386 CDH5P33151 784 aaPredicted RBP28.27■■■□□ 2.12
SSU72-201ENST00000291386 KLHDC10Q6PID8 442 aa28.27■■■□□ 2.12
SSU72-201ENST00000291386 BPIFB1Q8TDL5 484 aa28.27■■■□□ 2.12
SSU72-201ENST00000291386 IRGQQ8WZA9 623 aa28.27■■■□□ 2.12
SSU72-201ENST00000291386 IQCDQ96DY2 449 aa28.27■■■□□ 2.12
SSU72-201ENST00000291386 LRRC3BQ96PB8 259 aa28.27■■■□□ 2.12
SSU72-201ENST00000291386 XPO4Q9C0E2 1151 aaKnown RBP28.27■■■□□ 2.12
SSU72-201ENST00000291386 CCSER2Q9H7U1 834 aa28.27■■■□□ 2.12
SSU72-201ENST00000291386 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.27■■■□□ 2.12
SSU72-201ENST00000291386 CCL26Q9Y258 94 aa28.27■■■□□ 2.12
SSU72-201ENST00000291386 COCHO43405 550 aa28.26■■■□□ 2.11
SSU72-201ENST00000291386 NARSO43776 548 aaKnown RBP28.26■■■□□ 2.11
SSU72-201ENST00000291386 TLR5O60602 858 aa28.26■■■□□ 2.11
SSU72-201ENST00000291386 LCP1P13796 627 aa28.26■■■□□ 2.11
SSU72-201ENST00000291386 DAOAP59103 153 aa28.26■■■□□ 2.11
SSU72-201ENST00000291386 PDCLQ13371 301 aa28.26■■■□□ 2.11
SSU72-201ENST00000291386 KIAA1958Q8N8K9 716 aa28.26■■■□□ 2.11
SSU72-201ENST00000291386 CDK5RAP1Q96SZ6 601 aaKnown RBP28.26■■■□□ 2.11
SSU72-201ENST00000291386 ANP32EQ9BTT0 268 aa28.26■■■□□ 2.11
SSU72-201ENST00000291386 TRMT61BQ9BVS5 477 aaKnown RBP28.26■■■□□ 2.11
SSU72-201ENST00000291386 SMOC2Q9H3U7 446 aa28.26■■■□□ 2.11
SSU72-201ENST00000291386 NAGPAQ9UK23 515 aa28.26■■■□□ 2.11
SSU72-201ENST00000291386 CEP83Q9Y592 693 aa28.26■■■□□ 2.11
SSU72-201ENST00000291386 CUL9Q8IWT3 2517 aa28.26■■■□□ 2.11
SSU72-201ENST00000291386 CCDC172P0C7W6 258 aa28.25■■■□□ 2.11
SSU72-201ENST00000291386 RARGP13631 454 aa28.25■■■□□ 2.11
SSU72-201ENST00000291386 YWHAGP61981 247 aaKnown RBP eCLIP28.25■■■□□ 2.11
SSU72-201ENST00000291386 GPC5P78333 572 aa28.25■■■□□ 2.11
SSU72-201ENST00000291386 SIGLEC14Q08ET2 396 aa28.25■■■□□ 2.11
SSU72-201ENST00000291386 USP4Q13107 963 aa28.25■■■□□ 2.11
SSU72-201ENST00000291386 TADA2BQ86TJ2 420 aa28.25■■■□□ 2.11
SSU72-201ENST00000291386 GPIHBP1Q8IV16 184 aa28.25■■■□□ 2.11
SSU72-201ENST00000291386 MUC3AQ02505 3323 aa28.25■■■□□ 2.11
SSU72-201ENST00000291386 ITIH6Q6UXX5 1313 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 CHADO15335 359 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 LSM8O95777 96 aaKnown RBP28.24■■■□□ 2.11
SSU72-201ENST00000291386 RALAP11233 206 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 FERP16591 822 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 CDR2Q01850 454 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 GRM2Q14416 872 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 ZNF77Q15935 545 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 PASD1Q8IV76 773 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 TMEM35BQ8NCS4 154 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 NOX5Q96PH1 765 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 TRPV5Q9NQA5 729 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 ST7Q9NRC1 585 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 WNT16Q9UBV4 365 aa28.24■■■□□ 2.11
SSU72-201ENST00000291386 A0A1W2PQJ5 194 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 SART1O43290 800 aaKnown RBP28.23■■■□□ 2.11
SSU72-201ENST00000291386 MBL2P11226 248 aaPredicted RBP28.23■■■□□ 2.11
SSU72-201ENST00000291386 ATP5C1P36542 298 aaKnown RBP28.23■■■□□ 2.11
SSU72-201ENST00000291386 ZXDBP98169 803 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 PFKPQ01813 784 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 ARHGAP29Q52LW3 1261 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 TAF3Q5VWG9 929 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 SARM1Q6SZW1 724 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 C1orf131Q8NDD1 294 aaKnown RBP28.23■■■□□ 2.11
SSU72-201ENST00000291386 RIN3Q8TB24 985 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 IRF7Q92985 503 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 RBSNQ9H1K0 784 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 PDCL3Q9H2J4 239 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 EPHX3Q9H6B9 360 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 THG1LQ9NWX6 298 aaKnown RBP28.23■■■□□ 2.11
SSU72-201ENST00000291386 CPQQ9Y646 472 aa28.23■■■□□ 2.11
SSU72-201ENST00000291386 LRRC53A6NM62 1247 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 YJEFN3A6XGL0 299 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 E7ENQ6 273 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 MMEP08473 750 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 CHRNB2P17787 502 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 SNX16P57768 344 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 PLCB2Q00722 1185 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 FMO1Q01740 532 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 TRIM67Q6ZTA4 783 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 IRF2BP2Q7Z5L9 587 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 GAS2L3Q86XJ1 694 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 DDX42Q86XP3 938 aaKnown RBP eCLIP28.22■■■□□ 2.11
SSU72-201ENST00000291386 YAF2Q8IY57 180 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 SH3RF2Q8TEC5 729 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 NDRG1Q92597 394 aaKnown RBP28.22■■■□□ 2.11
SSU72-201ENST00000291386 DNASE1L2Q92874 299 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 PPP1R13BQ96KQ4 1090 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 ZFRQ96KR1 1074 aaKnown RBP28.22■■■□□ 2.11
SSU72-201ENST00000291386 CPXM1Q96SM3 734 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 AIPL1Q9NZN9 384 aa28.22■■■□□ 2.11
SSU72-201ENST00000291386 E5RJQ4 531 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 LEFTY2O00292 366 aa28.21■■■□□ 2.11
SSU72-201ENST00000291386 ARNTLO00327 626 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms